Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2651 ATGGCCACTGGTGTGCTGCTCCGTTCTCTTCGACGTCGCGATTTAGCCTCCTCCTCCCTTTCAGCTTATCGATCCCTAACAAGCAACGCCAAGCCATCATGGGGCAATTCTCACCTTAGCCAATCATGGGCAAGTTTGTGCAGGCCATTCAGTTCAAAGCCTGCTGGGAATGATGTAATTGGTATTGACTTGGGTACCACCAATTCTTGTGTTTCTGTCATGGAAGGAAAGAATCCAAAAGTTATTGAAAACTCTGAAGGTGCTAGGACCACACCGTCAGTGGTTGCTTTCAATCAGAAAGGTGAACTACTTGTAGGAACACCAGCAAAGAGACAGGCAGTGACAAATCCGACAAATACTGTATTTGGAACCAAACGTCTGGTTGGTAGACGCTTTGACGACCCTCAGACACAGAAGGAAATGAAGATGGTACCATACAAAATAGTCAGAGCTCCAAATGGAGATGCTTGGGTTGAAGCAAACGGACAGCAGTACTCACCGAGTCAGATTGGTGCCTTTGTTCTCACAAAGATGAAGGAAACTGCCGAGGCCTACCTTGGAAAGAGTGTGTCGAAGGCCGTGATTACTGTTCCAGCTTATTTCAATGATGCACAGAGACAGGCAACAAAGGATGCTGGCAGGATTGCTGGTTTGGATGTTCTTAGAATTATCAATGAGCCCACTGCTGCTGCACTTTCTTATGGAATGAACAACAAGGAGGGTCTCATTGCTGTTTTTGATCTTGGTGGTGGCACATTCGATGTTTCCATCTTGGAGATATCCAATGGTGTTTTTGAGGTGAAAGCAACAAATGGTGACACATTCTTGGGAGGAGAGGATTTTGACAATGCTCTACTGGACTTCCTTGTGAGTGAGTTCAAACGAACTGAGGGAATTGACCTTACCAAGGACAGGCTTGCCTTGCAGAGGCTTAGGGAGGCTGCCGAAAAGGCAAAGATTGAACTATCATCTACATCACAGACTGAAATTAACCTGCCATTTATCACTGCTGATGCAACTGGTGCAAAGCATCTGAACATCTCTTTGACCAGGTCGAAGTTTGAAAGCCTGGTTAATAACCTGATTGAAAGGACCAAGGCCCCATGCAAAAATTGTTTGAAGGATGCCAATATTTCTATCAAAGAGGTGGATGAAGTGCTTTTAGTCGGTGGAATGACTCGTGTACCTAAGGTGCAAGACGTTGTTACAGAAATTTTTGGAAAGAGCCCCAGCAAAGGAGTGAATCCTGATGAAGCAGTTGCTATGGGAGCTGCAATTCAGGGTGGCATTCTTCGTGGTGATGTCAAAGAATTGCTTCTTTTGGATGTTACCCCACTATCTCTCGGTATTGAGACACTTGGTGGTATCTTTACGAGGTTGATCAGTCGGAACACTACCATTCCAACTAAGAAGAGCCAGGTGTTCTCAACAGCAGCTGACAATCAGACCCAGGTCGGTATCAAGGTCTTGCAAGGTGAGAGAGAAATGGCTACTGACAACAAGCTTCTAGGGGAGTTTGAGTTGGTTGGAATTCCTCCTGCCCCAAGAGGAATGCCTCAAATTGAGGTGACATTTGACATTGACGCCAATGGTATTGTTACCGTCTCTGCCAAGGACAAGTCCACTGGTAAAGAGCAGCAAATCACCATTCGATCTTCTGGAGGACTCTCAGACGACGAAATTGAGAAAATGGTCAAGGAAGCAGAGTTGCACGCCCAGAAGGATCAAGAGAGGAAAGCTCTTATTGATATCAGAAACAGTGCCGACACTACCATCTACAGCATAGAGAAGAGCTTGGGTGAATATCGGGAGAAAATACCAGGCGAGGTCGCCAAAGAAATCGAGGATGCAGTGGCAGACTTGAGGAAGGCAATGTCAGAAGATGACATTGAACAAATCAAATCAAAACTCGATGCCGCCAACAAAGCTGTTTCCAAGATTGGGCAGCATATGGCTGGTGGTTCCGGTGGTGGTGCTGCTTCTGGAGGATCACAGGGTGGCGAACAAGCTTCCGAGGCCGAGTACGAAGAGGTGAAGAAATAA 2043 46.26 MATGVLLRSLRRRDLASSSLSAYRSLTSNAKPSWGNSHLSQSWASLCRPFSSKPAGNDVIGIDLGTTNSCVSVMEGKNPKVIENSEGARTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTVFGTKRLVGRRFDDPQTQKEMKMVPYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAEAYLGKSVSKAVITVPAYFNDAQRQATKDAGRIAGLDVLRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVSEFKRTEGIDLTKDRLALQRLREAAEKAKIELSSTSQTEINLPFITADATGAKHLNISLTRSKFESLVNNLIERTKAPCKNCLKDANISIKEVDEVLLVGGMTRVPKVQDVVTEIFGKSPSKGVNPDEAVAMGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLISRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMATDNKLLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKSTGKEQQITIRSSGGLSDDEIEKMVKEAELHAQKDQERKALIDIRNSADTTIYSIEKSLGEYREKIPGEVAKEIEDAVADLRKAMSEDDIEQIKSKLDAANKAVSKIGQHMAGGSGGGAASGGSQGGEQASEAEYEEVKK 680
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 44976485 44979919 - Lag0019735.1 Lac5g2651 609293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2651 680 MobiDBLite consensus disorder prediction 648 680 - -
Lac5g2651 680 Gene3D - 235 415 - -
Lac5g2651 680 Gene3D - 556 653 IPR029048 -
Lac5g2651 680 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 433 589 IPR029047 -
Lac5g2651 680 PRINTS 70kDa heat shock protein signature 414 434 - -
Lac5g2651 680 PRINTS 70kDa heat shock protein signature 383 399 - -
Lac5g2651 680 PRINTS 70kDa heat shock protein signature 251 261 - -
Lac5g2651 680 PRINTS 70kDa heat shock protein signature 109 117 - -
Lac5g2651 680 PRINTS 70kDa heat shock protein signature 193 213 - -
Lac5g2651 680 PRINTS 70kDa heat shock protein signature 86 98 - -
Lac5g2651 680 PRINTS 70kDa heat shock protein signature 437 456 - -
Lac5g2651 680 PRINTS 70kDa heat shock protein signature 58 71 - -
Lac5g2651 680 PRINTS 70kDa heat shock protein signature 518 534 - -
Lac5g2651 680 SUPERFAMILY Actin-like ATPase domain 240 431 IPR043129 -
Lac5g2651 680 FunFam Heat shock protein 9 122 173 - -
Lac5g2651 680 ProSitePatterns Heat shock hsp70 proteins family signature 3. 386 400 IPR018181 -
Lac5g2651 680 Coils Coil 623 643 - -
Lac5g2651 680 FunFam Chaperone protein DnaK HSP70 427 610 - -
Lac5g2651 680 ProSitePatterns Heat shock hsp70 proteins family signature 2. 245 258 IPR018181 -
Lac5g2651 680 Pfam Hsp70 protein 59 651 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
Lac5g2651 680 CDD HSPA9-like_NBD 56 431 - -
Lac5g2651 680 FunFam Molecular chaperone DnaK 60 241 - -
Lac5g2651 680 FunFam Chaperone protein HscA homolog 242 299 - -
Lac5g2651 680 Gene3D Actin; Chain A, domain 4 278 365 - -
Lac5g2651 680 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 556 655 IPR029048 -
Lac5g2651 680 FunFam Molecular chaperone DnaK 556 655 - -
Lac5g2651 680 ProSitePatterns Heat shock hsp70 proteins family signature 1. 62 69 IPR018181 -
Lac5g2651 680 NCBIfam molecular chaperone DnaK 59 651 IPR012725 GO:0005524(InterPro)|GO:0006457(InterPro)|GO:0051082(InterPro)
Lac5g2651 680 FunFam Molecular chaperone DnaK 278 365 - -
Lac5g2651 680 Hamap Chaperone protein DnaK [dnaK]. 56 678 IPR012725 GO:0005524(InterPro)|GO:0006457(InterPro)|GO:0051082(InterPro)
Lac5g2651 680 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 431 555 IPR029047 -
Lac5g2651 680 Coils Coil 301 328 - -
Lac5g2651 680 Gene3D - 60 428 - -
Lac5g2651 680 PANTHER HEAT SHOCK PROTEIN 70KDA 59 617 IPR013126 GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0005739(PANTHER)|GO:0140662(InterPro)
Lac5g2651 680 SUPERFAMILY Actin-like ATPase domain 59 239 IPR043129 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g1894 Lac-Chr2:19766686 Lac5g2651 Lac-Chr5:44976485 3.00E-25 dispersed
Lac5g2651 Lac-Chr5:44976485 Lac8g2498 Lac-Chr8:42879624 5.10E-141 dispersed
Lac5g2651 Lac-Chr5:44976485 Lac8g2506 Lac-Chr8:42909906 3.90E-157 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2651 K04043 - csv:101216102 1228.39