Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2686 ATGCGAAGTGCCTCTCAATCGCCGGATAATCAGCCGTTGCCGCCGAACCCACCTCCCAGACAAGGTGCTAAGCCAATCCCATTTCTGATTTCTATCGCTATTGGCCTTATTGTTCGCTTTGCCATCCCGAAACCGGCGGAGGTTTCGACTCAAGCCTGGCAGTTGCTGGCGATTTTCTTGTCGACGATTGCTGGGCTTGTGTTGAGTCCTTTGCCGGTTGGTGCTTGGGCGTTTCTTGGCTTGACTGTCACTGTGGTTACTAAGACTTTGACGTTTGCTGCTGCTTTTAATGCCTTTACCAGTGAGGTGATTTGGTTGATTGTCATTTCCTTCTTTTTTGCTCGTGGGTTTGTGAAAACTGGGTTGGGGGATCGAATTGCGACGTATTTTGTTAAATGGATGGGGAAGAGTACGCTTGGTTTGTCTTATGGGTTGACGCTCAGTGAGGCTTTGATTGCCCCTGCTATGCCTAGCACTACTGCCAGGGCTGGAGGTGTGTTTTTGCCCATTATTAAGTCCTTGTCGCTTGCTGCTGATAGTAAACCCAACGACCCTTCGTCTAAAAAGATCGGTGCTTATCTTGTTCAGTCTCAGTTTCAGTGTGCTGGTAACTCTAGTGCCCTTTTCCTAACTGCTGCTGCTCAAAACTTGTTGTGCCTTAAATTGGCTGAAGAACTTGGTGTACAAATATCTAGCCCCTGGCTTACTTGGGCCAAGTGTGCTTGTGTGCCAGCAGTCATCGGTCTCTTAGCAACTCCAGCAATCTTATACAAACTGTTTCCTCCAGAAACCAAGAACACGCCAGAAGCCCCAGCCATGGCTTCAAGAAAATTGGAGGCTATGGGTCCCGTCACAAAGAACGAATGGATCATGGTCGGTACTATGCTTATTGCAGTCTCATTATGGATCGCTGGAGAGGCCCTTAAAATACCTAGTGTTGTAGCTGCAATGATTGGCTTATCAATACTCCTTACTCTGGGTGTCCTAGATTGGGATGACTGCTTAGCCGAAAAGTCGGCCTGGGATACGTTAGCTTGGTTTGCTGTCCTTGTGGGCTTGGCAGGCCAATTGACAAGTCTCGGTCTCGTAGGCTGGATGTCGAATTGTGTGGCCCATTTGCTGAAGTCTCTCTCTCTCAGCTGGCCTGCAGCATTTGCTATTCTTCAGGTGTCTTACTTCTTCGTTCACTACCTCTTCGCTAGCCAAACCGGTCACGTTGGAGCTTTATACTCGGCGTTCCTTGCGATGCACTTGGCTGCCAAGGTGCCCGGTGTGTTGGCTGCACTGGCCTTGGCTTACAACACGAATCTCTTCGGCGCTCTGACTCACTACAGCAGTGGCCAAGCTGCTGTATACTATGGAGCGGGTTACGTCGAGCTACCAGACGTGTTCAAAATGGGTATCGTGATGGCCCTCGTAAACGGTACTATCTGGACCGTGTTTGGATGTATTTGGTGGAAGGTCCTGGGTCTATATTGA 1479 49.36 MRSASQSPDNQPLPPNPPPRQGAKPIPFLISIAIGLIVRFAIPKPAEVSTQAWQLLAIFLSTIAGLVLSPLPVGAWAFLGLTVTVVTKTLTFAAAFNAFTSEVIWLIVISFFFARGFVKTGLGDRIATYFVKWMGKSTLGLSYGLTLSEALIAPAMPSTTARAGGVFLPIIKSLSLAADSKPNDPSSKKIGAYLVQSQFQCAGNSSALFLTAAAQNLLCLKLAEELGVQISSPWLTWAKCACVPAVIGLLATPAILYKLFPPETKNTPEAPAMASRKLEAMGPVTKNEWIMVGTMLIAVSLWIAGEALKIPSVVAAMIGLSILLTLGVLDWDDCLAEKSAWDTLAWFAVLVGLAGQLTSLGLVGWMSNCVAHLLKSLSLSWPAAFAILQVSYFFVHYLFASQTGHVGALYSAFLAMHLAAKVPGVLAALALAYNTNLFGALTHYSSGQAAVYYGAGYVELPDVFKMGIVMALVNGTIWTVFGCIWWKVLGLY 492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 45273400 45276581 + Lag0019770.1 Lac5g2686 609328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2686 492 PIRSF DASS 16 492 IPR030676 -
Lac5g2686 492 Pfam Sodium:sulfate symporter transmembrane region 28 491 IPR001898 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Lac5g2686 492 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 13 492 IPR030676 GO:0005215(PANTHER)
Lac5g2686 492 MobiDBLite consensus disorder prediction 1 20 - -
Lac5g2686 492 NCBIfam DASS family sodium-coupled anion symporter 43 486 IPR001898 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g2686 Lac-Chr5:45273400 Lac9g2823 Lac-Chr9:46248895 1.80E-124 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2686 - - - 0.0