Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2714 ATGATGAAGCTGCAAACATATGCGGGAATTAGTTTCATTGCTACCATAGTGGTTATCTATCATGCCTTCAACAGTAGAGGCCAGTTTTACCCAGCATTAGTCTATTTATCAACTTCCAAGATCAATCTGGTGCTTCTTCTCAATATGGGTCTAGTCATCATGTGCATTTTGTGGCAGCTAACAAAAAAAATATTTCTTGGTTCTCTCCGAGAAGCAGAGGTTGAGAGGCTCAATGAGCAATCGTGGAAGGAGTTAATGGAAATCCTCTTTGCCATCACTATTTTCCGGCAAGATTTTTCTGTTGCATTCCTTGGAATGGTTACGGCTCTGTTGTTGATCAAAGCTTTGCATTGGTTGGCTCAGAAGAGGGTTGAATACATGGAAACCACTCCATCGGTGCCGTTGTTGTCTCATATCAGGATTGTTTCTTTCTTGGGGTTTCTCTTTGTTTTAGATAGTCTGTTTTTTTATAACTCGATAGAGTCTCTGATACAGACAAGGAAGGCCTCAGTTTCCCTCTTCTTTTCATTCGAGTATATGATTCTTGCGACAACAGCTGTGTCAACATTTGTGAAATATATTTTCTATGTCAGTGATGTACTCATGGAGGGACAATGGGAAAGGAAGCCTGTCTATACATTCTACTTGGAGCTTATCCGAGACTTACTTCACTTGTCGATGTACTTGTGTTTCTTTCTTGTGATTTTCATGACTTATGGCGTGCCTTTGCACTTGATCAGAGAGCTCTATGAGATCTTTAGGAATTTTAGGATTCGTATTGCAGATTACATCCGTTATAGAAAGATTACTTCAAACATGAATGATCGTTTTCCAGATGCAACGCCTGAAGAACTCAATTCAAGTGATGCAACATGCATTATTTGTCGTGAAGAGATGACAGTTGCGAAGAAACTAGTATGTGGGCATCTTTTTCACGTCCATTGCCTCCGGTCCTGGTTGGAGCGACAACATACTTGTCCCACTTGCAGAGCCCTTGTTGTACCACCCGAAGGTTCAAGCACAGCAGGAGGTCATCAGGGATTGCAGTCTGATGCTAACCAACAAGGAACCACAAATTCATCTACACAAGGTTCAAGTGGTACTGGTGTTGCTGGTGATAATTTGACTCATCATCAGGCTAGAGTCCGAGCTGCTGCGGCTGCTGCTTCAATATATGAGAAATCTTATGTTTATCCTTTCGCGAGCACATTAGTATGGTCTCCTGGATATGCAGTAGTTCCTCAGGTTCAAAGACCTTTGCCTGACTCCAACAATATAGAATCGAGTGGAGAACGAGCCCCCAATGAACAACCACAATATTTTCCATTTACTGGCGGCCCTGCAAACCTGTCCTTCACTCAAATTCCCCAAAATCTTTTTGTTCCTTTTCAGCCACGAGAGGGCACTGTAAACCATACAGATGGATTGGGAAGTAGTCAAAACATATCAGGCTCACAGCTTGAAGCCCAAGAAAGATTTCTTGAACAACAGATTGAGATCCTCAAAGATCAGCTGCAACTTCTGCGTAAACCAAAAGTTGAGGAAAGCTCAAGAGCAGCAGGCGAGGCAGATAAGAAAGGGAAAAGTGTAGCATCATCGTCACCGTCGTCGTCTTCATCGGTCTCAGATTCTCAGGCACCTGGAGAAATCGAAAGGATGCCAGCTCTTCACCAAAGCAAAGCAACGACTTCTCGTCTTTCCTTTCAATTCATCCCAATTTTCTCTGCAAATTTCCCTTTCTCTCTCCATGGAGCCCTCCAAACTCTGCATGTTTCCAATTTCATCTCCTCCTCTTCTTCTTCACCCATAGCATTTTCTTCAATTCCTTACTCCAAGTCTCCTCGGTCCTGTTGCGGTCAACGGGGGGGCTCCTCACGTTTTGGGCAGTTTCCTGGAAGGTTCCCTCAGAATCAATCGGTCAATGAGGTCGGAGCCTTGATTCCAGGATTCTGTTGGGCTCTGATCTCTTCGCGCTCCTCCTCCGAATTCGCTCTGCTCGCTATGTCTAATCGTTTCCAGTGTAAAATTTAG 2031 43.72 MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQLTKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLAQKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYMILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYGVPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMTVAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQGTTNSSTQGSSGTGVAGDNLTHHQARVRAAAAAASIYEKSYVYPFASTLVWSPGYAVVPQVQRPLPDSNNIESSGERAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTVNHTDGLGSSQNISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVASSSPSSSSSVSDSQAPGEIERMPALHQSKATTSRLSFQFIPIFSANFPFSLHGALQTLHVSNFISSSSSSPIAFSSIPYSKSPRSCCGQRGGSSRFGQFPGRFPQNQSVNEVGALIPGFCWALISSRSSSEFALLAMSNRFQCKI 676
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 45603811 45611882 - Lag0019798.1 Lac5g2714 609356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2714 676 MobiDBLite consensus disorder prediction 340 373 - -
Lac5g2714 676 CDD RING-H2_synoviolin 289 330 - -
Lac5g2714 676 SMART ring_2 292 329 IPR001841 -
Lac5g2714 676 MobiDBLite consensus disorder prediction 511 525 - -
Lac5g2714 676 Coils Coil 484 504 - -
Lac5g2714 676 ProSiteProfiles Zinc finger RING-type profile. 292 330 IPR001841 -
Lac5g2714 676 MobiDBLite consensus disorder prediction 529 546 - -
Lac5g2714 676 FunFam ERAD-associated E3 ubiquitin-protein ligase HRD1A 264 339 - -
Lac5g2714 676 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 264 336 IPR013083 -
Lac5g2714 676 PANTHER RING ZINC FINGER PROTEIN 2 337 IPR050731 -
Lac5g2714 676 SUPERFAMILY RING/U-box 272 336 - -
Lac5g2714 676 Pfam Ring finger domain 291 330 IPR001841 -
Lac5g2714 676 MobiDBLite consensus disorder prediction 342 373 - -
Lac5g2714 676 MobiDBLite consensus disorder prediction 511 548 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g1234 Lac-Chr11:17436989 Lac5g2714 Lac-Chr5:45603811 8.20E-17 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2714 K10601 - csv:101215351 951.429