Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2754 ATGGGTGATGGATGGAAGTTAGCTCACCTTCACAGGATTATGATGCTTTGTCCCGTCCAGCACATGTCACGAAGTTTGGTGAATTTTGGCTCGTTTCGAAAAAGTTCGGTAACTTTTGCAGTCTTAAGTATGTTACAAGTCGATAGGATTCTTGCAAAGGCAGGCACTGCCAAGTGCTATGAGTTGGCACCTCATCCATTGAAGAATTGTGTTGTTATACCAATGGCATTGGAACAAGTTTTATCGGATCGAGACAGTGAAGATGAAGTTGATGATGATGTTGCAGATCTTGAGGATAGGAGGATGCTCGATGATTTTGTCGATGTAACCAAGGATGAGAAGCAAATGATGCATATGTGGAACTCATTTGTCAGGAAGCAACGGGTGCTGGCAGATGGCCATATTCCCTGGGCTTGTGAGGCATTTTCACAATTACATGGACCAAACCTTGTCAAAACTCCAGCTCTGCTATGGTGCTGGAGATTGTTTATGATTAAGTTGTGGAACCATGGTCTACTTGATGCAAACTCCATGAACAGTTGTAACATCATTCTTGAAAGAATACATAGTGAAGTTTCCAATCCCAAAAGCTGA 594 42.42 MGDGWKLAHLHRIMMLCPVQHMSRSLVNFGSFRKSSVTFAVLSMLQVDRILAKAGTAKCYELAPHPLKNCVVIPMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLLDANSMNSCNIILERIHSEVSNPKS 197
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 45955214 45957122 + Lag0019838.1 Lac5g2754 609396
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2754 197 CDD VEFS-box_EMF2-like 74 188 - -
Lac5g2754 197 Pfam VEFS-Box of polycomb protein 72 183 IPR019135 -
Lac5g2754 197 PANTHER POLYCOMB GROUP PROTEIN 74 196 - GO:0005634(PANTHER)|GO:0031490(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g0358 Lac-Chr5:3709100 Lac5g2754 Lac-Chr5:45955214 1.10E-35 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2754 - - - 0.0