Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2756 ATGCCCACAAAATTCAAAACCCTTGCAACCACCACCCATGCCGAATTAGATGAATTCCAAGATGACGACGTCGACGACCACCAAAATGGCTCCTTCGCCGGCTCTTCACGGCGGCGCGTGCTCGACCCGCGCTGCGCGTGCGTGCAGCGGTGGAACCGCGTGGTTCTGCTGGCGCGTGCGGCATCTGTGGCGGTTGACCCGCTCTTCTTTTACGTCATTTTTCTGACCAAGGCCGGCCCGCCTTGCTTCTACCGGGATGCGGCTTTCGCCGCCGTCGTCACCGCCGTGCGCACGTGCGTGGACATGGTGCACGTGTGCCACGTGTGGATGCAGTTTCGGCTGGCGTTTGTTTCGACGGCGTCGTTGGTGGTCGGGAGTGGGCGGCTCGTGTGGGACGCACGTGCCATTGCTTCTCACTATTTGAGATCCTTCAAAGGCTTCTGGCTCGATTTGTTTGTGATTATTCCTATTCCTCAGGTTGTGACATGGTTGATAGTGCCAAAACTATTGAGAGAAGAAGAGATAAAAAAGATGATGAAAGTGGTGTTGGTGAGCTACCTATTTCAGTTGCTTCCAAAGCTTTACCACAGCATTTACTTGATGAAGAAGCTCCAAAAAGTCACTGGTTTCATCTTTGGCTGCATTTGGTGGCGCTTTAACCTCAATGTCTTTGCATATTTGATTGCTTCTCATGTTGCAGGAGGATGTTGGTATCTCCTAGCAACACAACGACTAATCTCGTGCCTCGAACAACAATGCGAAAGAAGAAAAATGTGCAAACTTGCATTGTCTTGCTCTTCCAATTCTCCCACATCTGGCTACTACAAAGGGGCAGGAAAATTTGGAGCTCCCCATGGTAATAACTTGACAAAGATCAAGTCCTTATGCTTGGAGGTCAATGGACCCTTCAGCTATGGAATTTATGAGCCTGTTCTCTTGGTATTCTCTAGCAATTCTTTAGCTGTTAGAATTCTCTATCCAGTCTTCTGGGGATTATTGAACCTGAGTTCCTTTGGCAATGAGCTTGATCCCACTAGTAATTTGGTTGAAGTGATATTCAGTAGCTGCATTACACTTGCAGGGTTGGTGCTGTTTGTTACCTTAATTGGAAATATACAGATTTTCTTGCAAACTGTCATGGCGAGTGAGGAGAATATGCAAATACGGTTTCGAGATATGAAGTGGTGGATGAGGAGGCGACAATTGCCCATTCATTTGAGGGAAAGGGTTTGCAATTTTGAATATCAAAGGTGGGTAGCCATGAGAGGGCTAGACGAGACCGAGCTCATTGGCGGGCTGCCCGATGGCCTCCGCCGAGACATCAAACGCTACCTTTGTTTAGACCTAGTTAAGAAGGTACCTTTCTTCCACATGCTAGATGATCTCATACTCGATAACATTTGTGATCGCGTTAAACCGCTCTTGTACGCCGAAGGTGAAAAGATAGTAAGGGAGGGAGACCCTGTGCAAAGGATGGTGTTCATTGTTGAAGGATGCGTAGAGCGTAGCCAAGGCTTTGTAGGCACAAGTTGGCTCAACTCTGGTGGCTTCTTCGGCGAGGAGCTACTCTCGTGGTGTCTCCGACTCCGACACCGTCGACATTCCGATGAGCTTCCAACCTCCTTGGCAACATTTTCATGTGTACAGCCAGTAGAAGCATATGGCCTCGACGCACTCGATCTCAAGTACATTACCGAACACTTTCGGTACAAGTTTGCAAGTGAAAAGATCAAGCGAGCGATGCGCTATTACTCTTCGAATTGGCGAACATGGGGAGCTGTGATCATTCAGTCTTCATGGCGTCGCCACCGGATACGAACTCGAGGTTACACGACACAAGACCGAACAGCTGACAATCGACTGAGGCAGTATGCTGCAGTTTTCTTGTCAATGAAGCCGAACGATCATCTCGAGTAG 1917 48.83 MPTKFKTLATTTHAELDEFQDDDVDDHQNGSFAGSSRRRVLDPRCACVQRWNRVVLLARAASVAVDPLFFYVIFLTKAGPPCFYRDAAFAAVVTAVRTCVDMVHVCHVWMQFRLAFVSTASLVVGSGRLVWDARAIASHYLRSFKGFWLDLFVIIPIPQVVTWLIVPKLLREEEIKKMMKVVLVSYLFQLLPKLYHSIYLMKKLQKVTGFIFGCIWWRFNLNVFAYLIASHVAGGCWYLLATQRLISCLEQQCERRKMCKLALSCSSNSPTSGYYKGAGKFGAPHGNNLTKIKSLCLEVNGPFSYGIYEPVLLVFSSNSLAVRILYPVFWGLLNLSSFGNELDPTSNLVEVIFSSCITLAGLVLFVTLIGNIQIFLQTVMASEENMQIRFRDMKWWMRRRQLPIHLRERVCNFEYQRWVAMRGLDETELIGGLPDGLRRDIKRYLCLDLVKKVPFFHMLDDLILDNICDRVKPLLYAEGEKIVREGDPVQRMVFIVEGCVERSQGFVGTSWLNSGGFFGEELLSWCLRLRHRRHSDELPTSLATFSCVQPVEAYGLDALDLKYITEHFRYKFASEKIKRAMRYYSSNWRTWGAVIIQSSWRRHRIRTRGYTTQDRTADNRLRQYAAVFLSMKPNDHLE 638
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 45967472 45971402 + Lag0019840.1 Lac5g2756 609398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2756 638 SMART cnmp_10 455 572 IPR000595 -
Lac5g2756 638 CDD CAP_ED 455 561 IPR000595 -
Lac5g2756 638 Gene3D Jelly Rolls 453 570 IPR014710 -
Lac5g2756 638 Gene3D Helix hairpin bin 381 446 - -
Lac5g2756 638 SUPERFAMILY Voltage-gated potassium channels 48 377 - -
Lac5g2756 638 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 31 620 - -
Lac5g2756 638 SUPERFAMILY cAMP-binding domain-like 382 568 IPR018490 -
Lac5g2756 638 ProSiteProfiles cAMP/cGMP binding motif profile. 455 523 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g2756 Lac-Chr5:45967472 Lac8g2728 Lac-Chr8:44715561 8.60E-215 dispersed
Lac5g2756 Lac-Chr5:45967472 Lac9g2595 Lac-Chr9:44480023 2.20E-101 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2756 K05391 - rcu:8281281 787.334