Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2786 ATGAACCCAGATTCTTATACTTTCGTTTTGTTCGTCTCTGTTGTTCTTTTGATCGTCGTCTCTTTCGTTGAGGTTCTTTCTGCAACTTCGACTACTCCAACAGCTTTACCACTTCAACTTCTCTCTCTGCTTTCCCTGAAATCCTCCATTAAAGACCCGTCGTCGAGCTTCCAAGACTGGGACCCTTCACCCACTTTCAGCAAAGCTGATTTTCAGGATCCAATTTGGTGTTCTTGGTCTGGAATTGAATGTCATCAGAACTCAGCTCAGATCACTTCCTTGGACTTGTCTCGTCGTAATCTCTCTGGCTTCATTCCTTCTGAAATCAAGTACTTGACGAGCTTAATCCACTTGAATTTGAGTGGCAACAGCTTTCTTGGGCCTTTCCCTACCGCCATTTTCGAGCTCCCTCAGCTTAGAACTCTCGATATTGGTTACAACAACTTCAGCTCCACTTTCCCACCTGGGATTTCTAAGCTCAAGTTCTTGAACGTCTTCAATGCCTACAGCAACGCCTTCACTGGCCCGTTACCGCAAGAAATCGCTCATCTCCGGTTCCTCGAATGGCTCAGCCTCGGTGGAAGCTACTTTAATGGCAGTATTCCGGCGAGCTACGGCGGTTTATCGCGGTTGAGGTATTTGAATTTGGCTGGAAATGTTCTGGACGGTCAAATTCCAGTGCAACTCGCGTACTTGACGCAACTCGAGAGAGTGGAAATCGGTTACAATAACTTCTCCGGCGGGATTCCGGTGGAATTTTCGTTGTTGCTGAATCTGAATTACTTAGATATCGCCGGAGCGAATCTCGCCGGAACTCTGCCGCAGGACATTGGGAACATGACAAAGCTTCAAAAGCTGCTTCTCTTCAAGAATCGAATCACGGGCGAAATTCCGGAAAGTTTAGGGAAATTAGAAGCGCTTAAGGAGCTTGATTTGTCTGAGAATCAACTCACCGGAAGAATTCCGTCGGATTTGTATAATCTGAAGGAATTGACAGAGTTGAGTTTGATGAGGAACGATCTCACCGGGGAAATTCCAGAAGCAGTTGGCGATCTTCCAAATCTAGCCATTTTGAAATTATGGAACAATTCGCTCACAGGATCACTCCCTCAGAAACTCGGCTTGAACGACGAGTTACAGCAAGTCGATGTGTCGTCGAATATGCTTACCGGGCCGATTCCTCCAAATCTCTGCCATGGAAACAAGCTCCTTAAGCTCATTCTGTTTTCCAACAAATTAGGGCACCAACTTCCCGCCTCTTTAGCGAACTGCACGTCTCTCTCTCGCTTTCGAATCCAAAATAACCGCCTCAACGGCTCGATTCCTCGCGGTTTCGGACTCCTGGAGAATCTGATATTCGCCGATTTCAGCAACAATAACTTCTCCGGCGAGATTCCGGCGGATTTTGGTAATGCAGTTAGGTTACAGTACTTGAACATTTCACAAAACGCCTTCGGAACTTCCTTGCCGGAGAATATCTGGAACTCGACGACGTTAGAGATTTTCTCGGCCAGTTCTTCGAAAATCGTTGGTAATATCCCCGATTTCGTTGGATGTAGATCCATCTACAAGATCGAACTCCAGGACAATGACTTAAACGACAGTATTCCGTGGACAATCGGCCACTGCGAGAAGTTAGTCACTCTGAATTTAAGCCGGAATTCATTAACCGGCATTATTCCATGGGAGATTTCAACGCTGCCGTCGATCACCGCCATTGATCTCTCACGAAACTTCCTCACAGGTACAATCCCTTCAAATTTCCAAAACTGCAGCACAATCGAAAGCTTCAACGTATCATACAACAACCTCACCGGCCCCATTCCATCTACCGGAACGATCTTCCCGGGATTACACCCGTCGTCATTCACCGGCAACGACGGACTCTGCGGCGAGATTCTAGCAAAACCCTGCGCCGCCGACACACTCTCCGCCGGCGCGATAGAGGTCCGGCAGCAGCAGCCGCGACGGACGGCGGGAGCAATAGTGTGGATAATGGCAGCGGCGTTCGGAATCGGACTGTTCGTGTTAGTAGCCGGAACGCGGTGTTTTCAGGCGAATTACAGCCGTGGATTCGGCGGTGGCGACGAGGAAATCGGACCGTGGAAATTAACCGCCTTTCAACGGTTGAACTTCACGGCGGAGGACGTGTTAGAGTGTTTGTCAATGACGGATAAGATCCTGGGAATGGGGTCCACAGGGACAGTTTACAAAGCGGAGATGCCAGGTGGCGAGATCATAGCGGTGAAGAAACTGTGGGGTAAATACAAAGAGAACATCCGACGGCGGAGAGGGGTTCTGGCGGAAGTGGATGTACTGGGGAACGTGAGGCACAGGAACATAGTGAGATTGTTAGGGTGCTGCAGCAACAGGGACTGTACCATGCTGCTCTACGAGTATATGCCGAACGGTAATTTGGACGATTTACTGCACGGTAAAAACAAGGGTGAAAATTTGTGCGCGGATTGGATGACCAGGTATAAAATTGCACTGGGTGTGGCTCAGGGGATTTGTTATCTTCACCACGACTGTGATCCGGTGATCGTCCACCGTGATCTCAAGCCGAGTAATATTCTATTGGACGGTGAGATGGAGGCCAGAGTCGCGGATTTTGGCGTCGCTAAGTTGATCCAGACCGATGAATCCATGTCGGTGATCGCCGGATCGTACGGTTACATTGCGCCAGAATATGCTTACACGCTTCAAGTGGACGAAAAGAGTGATATTTATAGCTACGGAGTCGTGTTGATGGAGATAGTGAGTGGAAAGAGATCCGTGGATCCAGAATTTGGCGATGGGAATAGCATTGTGGATTGGGTGAGATCCAAGATTAAGATGAAGGATGGAGTGAACCAAATATTGGACAACAACGCTGGCGCATCATGTGCATCTGTTAGAGAAGAAATGATACAGATGCTTCGAATTTCATTGCTCTGTACCAGTCGCAACCCTGCAGATCGGCCATCGATGCGTGACGTTGTTTTGATGCTGCAAGAGGCGAAACCTAAGAGAAAATTGCCTGGAAACGTTGTCAGCGGTAGTGATAATATAATTTGCAGCCGTCGTGGTGGGGGTGGTGACATCCTTTTAGTTCACAAGACAGTAGATGAGTGTTAA 3117 48.35 MNPDSYTFVLFVSVVLLIVVSFVEVLSATSTTPTALPLQLLSLLSLKSSIKDPSSSFQDWDPSPTFSKADFQDPIWCSWSGIECHQNSAQITSLDLSRRNLSGFIPSEIKYLTSLIHLNLSGNSFLGPFPTAIFELPQLRTLDIGYNNFSSTFPPGISKLKFLNVFNAYSNAFTGPLPQEIAHLRFLEWLSLGGSYFNGSIPASYGGLSRLRYLNLAGNVLDGQIPVQLAYLTQLERVEIGYNNFSGGIPVEFSLLLNLNYLDIAGANLAGTLPQDIGNMTKLQKLLLFKNRITGEIPESLGKLEALKELDLSENQLTGRIPSDLYNLKELTELSLMRNDLTGEIPEAVGDLPNLAILKLWNNSLTGSLPQKLGLNDELQQVDVSSNMLTGPIPPNLCHGNKLLKLILFSNKLGHQLPASLANCTSLSRFRIQNNRLNGSIPRGFGLLENLIFADFSNNNFSGEIPADFGNAVRLQYLNISQNAFGTSLPENIWNSTTLEIFSASSSKIVGNIPDFVGCRSIYKIELQDNDLNDSIPWTIGHCEKLVTLNLSRNSLTGIIPWEISTLPSITAIDLSRNFLTGTIPSNFQNCSTIESFNVSYNNLTGPIPSTGTIFPGLHPSSFTGNDGLCGEILAKPCAADTLSAGAIEVRQQQPRRTAGAIVWIMAAAFGIGLFVLVAGTRCFQANYSRGFGGGDEEIGPWKLTAFQRLNFTAEDVLECLSMTDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKYKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRDCTMLLYEYMPNGNLDDLLHGKNKGENLCADWMTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQTDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEIVSGKRSVDPEFGDGNSIVDWVRSKIKMKDGVNQILDNNAGASCASVREEMIQMLRISLLCTSRNPADRPSMRDVVLMLQEAKPKRKLPGNVVSGSDNIICSRRGGGGDILLVHKTVDEC 1038
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 46234150 46239272 + Lag0019870.1 Lac5g2786 609428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2786 1038 Pfam Protein kinase domain 725 994 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac5g2786 1038 SMART LRR_typ_2 208 232 IPR003591 -
Lac5g2786 1038 SMART LRR_typ_2 304 328 IPR003591 -
Lac5g2786 1038 SMART LRR_typ_2 352 376 IPR003591 -
Lac5g2786 1038 SMART LRR_typ_2 473 496 IPR003591 -
Lac5g2786 1038 SMART LRR_typ_2 567 590 IPR003591 -
Lac5g2786 1038 SMART LRR_typ_2 136 160 IPR003591 -
Lac5g2786 1038 ProSitePatterns Serine/Threonine protein kinases active-site signature. 848 860 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac5g2786 1038 SUPERFAMILY L domain-like 70 412 - -
Lac5g2786 1038 FunFam leucine-rich repeat receptor-like protein kinase TDR 801 1009 - -
Lac5g2786 1038 Gene3D Phosphorylase Kinase; domain 1 704 800 - -
Lac5g2786 1038 FunFam Leucine-rich repeat receptor-like protein kinase 39 201 - -
Lac5g2786 1038 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 22 1000 IPR050647 -
Lac5g2786 1038 ProSitePatterns Protein kinases ATP-binding region signature. 728 751 IPR017441 GO:0005524(InterPro)
Lac5g2786 1038 ProSiteProfiles Protein kinase domain profile. 722 1001 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac5g2786 1038 SMART serkin_6 722 1001 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac5g2786 1038 Pfam Leucine Rich Repeat 474 495 IPR001611 GO:0005515(InterPro)
Lac5g2786 1038 Pfam Leucine Rich Repeat 379 399 IPR001611 GO:0005515(InterPro)
Lac5g2786 1038 Pfam Leucine Rich Repeat 450 471 IPR001611 GO:0005515(InterPro)
Lac5g2786 1038 SUPERFAMILY L domain-like 321 630 - -
Lac5g2786 1038 Gene3D Ribonuclease Inhibitor 39 204 IPR032675 -
Lac5g2786 1038 Gene3D Ribonuclease Inhibitor 329 644 IPR032675 -
Lac5g2786 1038 Gene3D Ribonuclease Inhibitor 205 328 IPR032675 -
Lac5g2786 1038 Pfam Leucine rich repeat 282 341 IPR001611 GO:0005515(InterPro)
Lac5g2786 1038 Pfam Leucine rich repeat 521 578 IPR001611 GO:0005515(InterPro)
Lac5g2786 1038 Pfam Leucine rich repeat 90 149 IPR001611 GO:0005515(InterPro)
Lac5g2786 1038 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 695 800 - -
Lac5g2786 1038 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 226 321 - -
Lac5g2786 1038 SUPERFAMILY Protein kinase-like (PK-like) 725 997 IPR011009 -
Lac5g2786 1038 Gene3D Transferase(Phosphotransferase) domain 1 801 1012 - -
Lac5g2786 1038 FunFam Leucine-rich repeat receptor-like protein kinase TDR 325 640 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g2576 Lac-Chr11:41814367 Lac5g2786 Lac-Chr5:46234150 8.30E-103 dispersed
Lac3g0125 Lac-Chr3:885970 Lac5g2786 Lac-Chr5:46234150 2.20E-53 dispersed
Lac5g1860 Lac-Chr5:36849506 Lac5g2786 Lac-Chr5:46234150 6.60E-84 dispersed
Lac5g2786 Lac-Chr5:46234150 Lac8g2219 Lac-Chr8:40524688 9.40E-86 dispersed
Lac6g2876 Lac-Chr6:46380435 Lac5g2786 Lac-Chr5:46234150 3.00E-46 dispersed
Lac5g2786 Lac-Chr5:46234150 Lac10g0915 Lac-Chr10:7306255 2.90E-87 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86225 PF00069 Pkinase 1.40E-46 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2786 - - - 0.0