Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2789 ATGGCCAAAAATATGGAGCTGCAAGATTTACAGAAGTCACAAGTTGCTGAAACTAGTTCATTACCTTCATCAAATGTTGACGAACTTCATCAAGAAATTTCTAATATCCAAGAGGAGATACAAGAGAATAAGTTGCTTCTGGAAAAGTTTAGAGATAGAATGAAAGAAGCGGAAGCAAAGGCAAAAGATCTTAAAGCATCATTTGAGAATCTGTGTGAGTCAGCGAAAGGAGAAATTGATGCATTTGAAGAAGCTGAGAGAGATATGATGCAGATTGAACGAGATCTGCATTCTGCAGAAAAGGAGAAGGATCATTATGAAGGCATTATGACTAACAAGGTCCTTTTTGATATCAAAGAGGCAGAGAGACAATATCAGGAGCTTGAGTGCCATCGTAAGGAGAGTTACAGTAAGGCTTCAATAATATGTCCTGAGAGCGAAATTGAGGCTTTAGGTGATTGGGACGGGAGCACACCCGAACAACTCAGTGCACAATTAACAAGGCTAAATCAGAGACTTAATAATGAGACCAGAAGATATTCTGAATCTTTGGAAGACCTGAGGATGATGTATGAGAAAAAGGAGCGTACAATACTAAGAAAACAACAGACTTACAAAGGTTTTAGAGAGAAGTTGAATGCTTGCCAGAAAGCTCTGGAGCTACGGTGGAACAAGTTTGAAAGGAATGCTAATCTTTTGAAGCGCCAATTAACTTGGCAATTTAATGGTCATTTAAGAAAAAAAGGGATCAGTGGAAATATAAAAGTCAATTACGAGGAAAAGACCCTCTCGGTTGAGGTGAAGATGCCCCAAGATGCATCCAGCAGTTCTGTTCGCGATACACGTGGACTTTCAGGTGGAGAACGGTCATTTTCCACTCTATGCTTCGCTTTGGCATTACACGAAATGACAGAAGCCCCATTTCGAGCAATGGATGAGTTTGATGTGTTTATGGATGCAGTAAGTCGGAAAATTAGCTTAGACACTCTTGTGGATTTTGCATCAGCACAAGGTTCCCAATGGATATTTATCACGCCTCATGATATCGGCATGGTAAAACAAGGAGCACGAATCAAGAAGCAGCAAATGGCAGCTCCTCGATCATGA 1107 40.47 MAKNMELQDLQKSQVAETSSLPSSNVDELHQEISNIQEEIQENKLLLEKFRDRMKEAEAKAKDLKASFENLCESAKGEIDAFEEAERDMMQIERDLHSAEKEKDHYEGIMTNKVLFDIKEAERQYQELECHRKESYSKASIICPESEIEALGDWDGSTPEQLSAQLTRLNQRLNNETRRYSESLEDLRMMYEKKERTILRKQQTYKGFREKLNACQKALELRWNKFERNANLLKRQLTWQFNGHLRKKGISGNIKVNYEEKTLSVEVKMPQDASSSSVRDTRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFASAQGSQWIFITPHDIGMVKQGARIKKQQMAAPRS 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 46257544 46260184 + Lag0019873.1 Lac5g2789 609431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2789 368 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 355 IPR027417 -
Lac5g2789 368 Coils Coil 166 204 - -
Lac5g2789 368 Coils Coil 26 109 - -
Lac5g2789 368 MobiDBLite consensus disorder prediction 1 32 - -
Lac5g2789 368 Gene3D - 144 363 IPR027417 -
Lac5g2789 368 MobiDBLite consensus disorder prediction 7 31 - -
Lac5g2789 368 Coils Coil 118 138 - -
Lac5g2789 368 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 2 366 - GO:0000724(PANTHER)|GO:0003684(PANTHER)|GO:0003697(PANTHER)|GO:0005634(PANTHER)|GO:0030915(PANTHER)|GO:0035861(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac4g2613 Lac-Chr4:45166423 Lac5g2789 Lac-Chr5:46257544 2.20E-08 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2789 K22804 - csv:101208493 664.07