Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2867 ATGGCTGATTCTCTTGTGAAATGGCTCTGTTTGCTTCTGTTTCTTCACTGTTTGCTTCTTTCAAGAGCTCAGCTTTTGAAAACTTATGTCGTTCAAATGGACAGGTCTGCAATGCCGGCCTCATTCTCGGATCATTTCCAGTGGTACTCCACAGTTCTAAGCAATGTGGTGGTTAGCCCTGAGAGACAAGGTAATGGGGGAGGTGAAGAGAGGATCATTTACAGTTACCAGAGTGTTTTCCATGGAGTTGCAGCTCGGTTGAGTGAAGAAGAGACTGAGAGGCTCGAGGAAGAAGATGGGGTGTTGGCCATTTTTCCGGAGACTAAGTATGAGCTTCATACAACGAGAAGCCCCAAGTTTCTTGGGCTTGAACCGGCTGACAGCAACAGCGCCTGGTCTCAGCAGATCGCAGACCATGACGTGATCGTTGGAGTTTTGGATACTGGGATTTGGCCGGAGAGTGAGAGCTTCAACGACGCTGGAATGTCGCCGGTGCCGCCGCATTGGAAAGGGGAATGTGAAACAGGGCGAGGCTTTACGAAACACAATTGTAATAGAAAGATCGTCGGCGCCAGAGTGTTCTACCATGGCTATGAAGCTGCGACTGGGAAATTTAACGAACAGTTGGAGTACAAATCGCCGAGGGATCAAGATGGGCATGGAACTCACACGGCGGCTACCGTCGCCGGCTCTCCGGTGGCCGGCGCGAGCCTCCTTGGTTATGCTTATGGAACGGCCAGAGGAATGGCGCCCGGTGCTAGAATTGCCGCCTACAAAGTCTGTTGGGTCGGCGGCTGCTTTAGCTCCGACATTTTGTCGGCTGTGGATAGAGCTGTGGCCGACGGAGTAAATGTTCTGTCCATCTCTTTGGGAGGTGGGGTCTCTTCTTACTATCGCGATAGCCTTTCAGTTGCAGCATTTGGGCAATGGAGATGGGCGTGTTTGTCTCCTGTTCGGCCGGAAATGGAGGGCCGGACCCTGTAA 984 52.03 MADSLVKWLCLLLFLHCLLLSRAQLLKTYVVQMDRSAMPASFSDHFQWYSTVLSNVVVSPERQGNGGGEERIIYSYQSVFHGVAARLSEEETERLEEEDGVLAIFPETKYELHTTRSPKFLGLEPADSNSAWSQQIADHDVIVGVLDTGIWPESESFNDAGMSPVPPHWKGECETGRGFTKHNCNRKIVGARVFYHGYEAATGKFNEQLEYKSPRDQDGHGTHTAATVAGSPVAGASLLGYAYGTARGMAPGARIAAYKVCWVGGCFSSDILSAVDRAVADGVNVLSISLGGGVSSYYRDSLSVAAFGQWRWACLSPVRPEMEGRTL 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 46909412 46910395 + Lag0019951.1 Lac5g2867 609509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2867 327 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 308 IPR045051 -
Lac5g2867 327 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 113 IPR037045 -
Lac5g2867 327 CDD Peptidases_S8_3 110 308 IPR034197 -
Lac5g2867 327 Pfam Subtilase family 139 296 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lac5g2867 327 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Lac5g2867 327 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Lac5g2867 327 SUPERFAMILY Subtilisin-like 112 306 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac5g2867 327 FunFam Subtilisin-like protease SBT1.9 18 113 - -
Lac5g2867 327 Gene3D Peptidase S8/S53 domain 140 307 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac5g2867 327 Pfam Peptidase inhibitor I9 28 113 IPR010259 -
Lac5g2867 327 ProSiteProfiles Serine proteases, subtilase domain profile. 109 327 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g2867 Lac-Chr5:46909412 Lac9g1818 Lac-Chr9:37984925 4.10E-72 dispersed
Lac5g2867 Lac-Chr5:46909412 Lac6g0258 Lac-Chr6:2099405 1.20E-92 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2867 - - - 0.0