Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2868 ATGGACAGAGATTTCCCGGCCATTGTCAAGCTCGGCGATGGCAGAACAGTCACCGGCGTTTCACTTTACAGAGGAAGAATCACAATTCCGGAAAACAAGCAATTCCCAGTTGTGTACATGGGGAGTAATTCGAGCAGCCCTGATCCGAGCTCGCTCTGTTTGGAAGGAACTTTAGATCCACATTTCGTGGCCGGGAAAATTGTGATATGCGATCGAGGAATTAGCCCTCGGGTCCAGAAGGGTGTGGTGGTGAAAAATGCAGGTGGGATTGGGATGATTCTGTCGAACACGGCGGCGAATGGGGAAGAACTCGTTGCCGATTGCCATTTGGTACCAGCCGTCGCCGTCGGAGAAAAAGAAGGCAAAGCAATTAAGCAATACGCATTAACGAATCGAAAAGCAACGGCGACTCTAGGGTTCTTGGGGACAAGATTGGGGGTTAAACCCTCGCCGGTGGTGGCGGCGTTTTCATCGAGAGGACCAAATTTCCTCACACTCGAAATCCTCAAGCCCGATCTAGTGGCTCCCGGCGTAAACATCCTCGCCGCTTGGACCGGAAAAACAGGGCCGTCGAGCTTGACGACGGACACCAGAAGGGTCAAATTCAACATTCTTTCAGGAACTTCAATGTCGTGCCCTCACGTCAGTGGCGTAGCGGCTCTGATCAAATCAAAGCATCCCGATTGGAGCCCGTCGGCGATCAAATCGGCGCTGATGACCACCGCTTACGTCCACGACAACACCTACAAGCCTCTCAGAGACTCCTCAGCCACATCGCCGTCGAGTCCGTATGACCATGGCGCCGGCCACATAAACCCAAGAAAAGCCCTAGATCCTGGTTTGGTTTACGAAATTCAGCCGCAAGATTACTTCGAATTCCTCTGTACACAAGATTTAACCCCGTCGCAACTCAAAGTCTTCTCCAAGTATTCAAACAGAACGTGCAATCGCCTTCTCCCCAACCCCGGAGATTTGAATTACCCGGCCATCTCCGCCGTTTTTCCAGAGAAAACCTCCGTCACTTCCCTGACCCTTCACAGAACCGTCACCAACGTCGGCCCTGCAGCCTCCAGTTACCGTGCGGTGGTGACGCCGTTCAAGGGCGCCGCCGTGAAAGTGGAGCCGGAGAGTCTGAACTTCACGAGGAGATATCAGAAGCTCTCTTACAGAATCACTTTTCTGTCGAAGAAGAGACAGAGTATGCCGGAATTCGGAGGGCTGATTTGGAAGGATGGAAGTCACAAAGTGAGAAGCCCGATTGTCATCACTTGGTTGTCGTTTGTTTGA 1287 52.21 MDRDFPAIVKLGDGRTVTGVSLYRGRITIPENKQFPVVYMGSNSSSPDPSSLCLEGTLDPHFVAGKIVICDRGISPRVQKGVVVKNAGGIGMILSNTAANGEELVADCHLVPAVAVGEKEGKAIKQYALTNRKATATLGFLGTRLGVKPSPVVAAFSSRGPNFLTLEILKPDLVAPGVNILAAWTGKTGPSSLTTDTRRVKFNILSGTSMSCPHVSGVAALIKSKHPDWSPSAIKSALMTTAYVHDNTYKPLRDSSATSPSSPYDHGAGHINPRKALDPGLVYEIQPQDYFEFLCTQDLTPSQLKVFSKYSNRTCNRLLPNPGDLNYPAISAVFPEKTSVTSLTLHRTVTNVGPAASSYRAVVTPFKGAAVKVEPESLNFTRRYQKLSYRITFLSKKRQSMPEFGGLIWKDGSHKVRSPIVITWLSFV 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 46910443 46911729 + Lag0019952.1 Lac5g2868 609510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2868 428 Gene3D - 2 146 - -
Lac5g2868 428 Pfam PA domain 36 124 IPR003137 -
Lac5g2868 428 ProSitePatterns Serine proteases, subtilase family, serine active site. 207 217 IPR023828 -
Lac5g2868 428 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 421 IPR045051 -
Lac5g2868 428 Pfam Fibronectin type-III domain 324 422 IPR041469 -
Lac5g2868 428 Gene3D Peptidase S8/S53 domain 1 290 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac5g2868 428 FunFam subtilisin-like protease SBT1.5 2 145 - -
Lac5g2868 428 ProSiteProfiles Serine proteases, subtilase domain profile. 1 277 - -
Lac5g2868 428 CDD PA_subtilisin_like 9 138 - -
Lac5g2868 428 Gene3D - 294 425 - -
Lac5g2868 428 SUPERFAMILY Subtilisin-like 153 281 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac5g2868 428 Pfam Subtilase family 131 248 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g2868 Lac-Chr5:46910443 Lac9g1818 Lac-Chr9:37984925 3.10E-120 dispersed
Lac5g2868 Lac-Chr5:46910443 Lac1g2631 Lac-Chr1:47657902 2.00E-122 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2868 - - - 0.0