Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2905 ATGGCATCTTCTCGTCTGGCTGGAGGATTAGCACAGTCTTCATCAAGTTCTGGGATTTTCTACCAAGGAGAAGGGCAGTCTTCAGCTATTGTTAATTCTCACTTGAGCCAATCATTTGCAAATTCATCAAATTCAATTCCTGGAACTGGATGTTCTGATTTTGGTCCAGTTTCCGGAGACATGAATAATGCTGGTTTAAATAGCGTGGCAAATTCAGGGCCCAGTGTGGGTGTAAGTTCATTGGTTACAGATGCAAACTCTGCCCTTTCAGGGGGGCCACATTTGCAAAGGAGTGCAAGCATCAATACAGAGTCATACATGCGCTTGCCTGCATCGCCTATGTCTTTCAATTCAAATAACATTAGTGTGTCAGGTTCCTCAGTTATAGATGGATCCTGCGTAGTGCAGCAAAATTCTCAACAGGACCAAAATATCCAACACGTTCAGCAACAGGCACAGCAAGGTGCTTCACATGCCACATCATTACCAACATCACAAATAGGCCAAGTATCACTTCCCATGGGTGCAAAACTTCAGGGACCTTTCATTCCAGATCCAAATAATTATTCTCAGGTGCAGAAGAAACCACGACTGGATATAAAACAGGAAGATGTGCTGCAACAGCAAGTTTTGCAGCAGATATTTCAGAGACAAGATTCCATGCAGTCACAAAACCGTAACTCACAGTTACAAGCTTTATTTCAACAACAAAGAATGCGGCAACAGCAGCAGATCTTGCAGTCTCTACCTCAGTACAGAGCTCAGTTTCAGCAGCAGCAGCAACAACAGATGCAGTTGAGGCAGCAATTGCAACAACAGCAGGCAATGCAGCCAGTATCACCCTTGAAGCGCCCATATGATGGAGGTGTTTGTGCTCGTCGGCTGATGCAGTACCTATATCATCAACGGCAAAGGCCTCCTGAGAATAGCATAGCCTACTGGAGAAAGTTTGTAACAGAGTATTACTCTCCTCGTGCAAAGAAAAGATGGTGCTTGTCATTGTATGAGAATGTTGGACACCATGCTCTTGGTGTGTTCCCCCAGGCAGCTATGGATGCGTGGCAGTGTGACATCTGCGGTTCTAAATCAGGAAGGGGCTTTGAGGCTACGTTTGAAGTACTCCCAAGACTCAGCGAGATCAAATTTGGAAGTGGAGTTATTGACGAGCTTTTATTTCTGGACCTTCCTCAAGAAAGGAGATTTCCTTCTGGAATTATGATGTTAGAATATGGTAAAGCAATTCAAGAGAGTGTATATGAGCAACTTCGTGTTGTTCGTGAGGGTCAGCTTCGTATCATATTCACACAAGACTTGAAGATTTTGTCTTGGGAATTTTGTGCACGGCGTCATGAAGAACTTCTTCCTCGTAGGTTGGTTGCACCTCAGGTGAATCAGCTGTTACAGGTTGCCCAGAAATGCCAAAGCACAATTGCTGAAAGTGGTCCTGATGGTCTCTCTCAGAAAGATTTGCAGACAAATAGCAATATGGTACTGACGGCTGGTCGTCAGCTTGCCAAGAGTCTGGAGTTGCAGTTGCTGAATGACTTGGGTTTCTCTAAAAGATACGTGAGGTGTTTGCAGATATCAGAGGTTGTCAACAGTATGAAAGATCTGATTGGTTTCTGCCGGGATCAAAAAGTTGGACCTATTGAGGGCTTGAAAAATTATCCTAGACATGCCACTGCAGCCAAGCTCCAGATGCAAAAAATGCAGGAGATGGAGCAGTTAGCAAGTATTCAAGGTCTTCCCACAGACCGCAACACAATTAATAAGCTGATGGCAATGCATCCTGAACTTGATAGCCATGGGATTAACAACCATCAAATGGTTGGTCGAGGAGGTTTGAGTGGTTCGGCACAAGCTGCTTTGGCACTGACTACATACCAGAATATTCTCATGAGACAAAACTCTATGAATTCCAACCCTAGCCCACACCAACAGGAGGCCTCATCTTCTTTCAATAATTCCAACTATAATCCATCCCCTACACTCCAGGGGACTGCATCCTTGATGCCTGGATCCATGCAGAACTCCTCTGTCGGTGGCTTTTCCAGCGTCCAGCAACCCTTGCAAAAGCAATCGCAGCAGCTGCAACAGCATCCTCCAAATGCTGGCTCCTTGGTCCAACAAAATCATCCGCAGACGATTCAGAGTAGCCAGGCCATACAACAACAGATGATCCAGCAACTACTGCAGATGTCAGGTAACAGTAAGAGTGGCGGCGCACAACAGCAACCCCTTACCGGACCAAATGCAAATAGAAGTATGGGAAGAAGAGGTATGGGTTTTGTAGGCAACAACCCAGTTGCCGCTGTGCCGTCTGGAAATCTGTCTGGGAGCAATGTCCCTGGCCCGAGTAGAAGCAATAGCTTCAAAGCTGCTTCAAATAGCGAGTCCTCAGCTGGTAACAGTGGATTCAATCAAAAGGCTTCTGATTTGCCTCAAGATCTTCATCTGCCAGAGGGTCTGGTTGACGATATAGGCCAAGATTTCCCTGAAAACGGGTTTATTAACAATGACCTTGATGAGGATTTGGGTTATGTTTGGAAGGCTTGA 2556 45.54 MASSRLAGGLAQSSSSSGIFYQGEGQSSAIVNSHLSQSFANSSNSIPGTGCSDFGPVSGDMNNAGLNSVANSGPSVGVSSLVTDANSALSGGPHLQRSASINTESYMRLPASPMSFNSNNISVSGSSVIDGSCVVQQNSQQDQNIQHVQQQAQQGASHATSLPTSQIGQVSLPMGAKLQGPFIPDPNNYSQVQKKPRLDIKQEDVLQQQVLQQIFQRQDSMQSQNRNSQLQALFQQQRMRQQQQILQSLPQYRAQFQQQQQQQMQLRQQLQQQQAMQPVSPLKRPYDGGVCARRLMQYLYHQRQRPPENSIAYWRKFVTEYYSPRAKKRWCLSLYENVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLSEIKFGSGVIDELLFLDLPQERRFPSGIMMLEYGKAIQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQLLQVAQKCQSTIAESGPDGLSQKDLQTNSNMVLTAGRQLAKSLELQLLNDLGFSKRYVRCLQISEVVNSMKDLIGFCRDQKVGPIEGLKNYPRHATAAKLQMQKMQEMEQLASIQGLPTDRNTINKLMAMHPELDSHGINNHQMVGRGGLSGSAQAALALTTYQNILMRQNSMNSNPSPHQQEASSSFNNSNYNPSPTLQGTASLMPGSMQNSSVGGFSSVQQPLQKQSQQLQQHPPNAGSLVQQNHPQTIQSSQAIQQQMIQQLLQMSGNSKSGGAQQQPLTGPNANRSMGRRGMGFVGNNPVAAVPSGNLSGSNVPGPSRSNSFKAASNSESSAGNSGFNQKASDLPQDLHLPEGLVDDIGQDFPENGFINNDLDEDLGYVWKA 851
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 47221808 47227518 + Lag0019989.1 Lac5g2905 609547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2905 851 PANTHER LIM DOMAIN-BINDING PROTEIN 15 840 IPR029005 GO:0000122(PANTHER)|GO:0005634(PANTHER)|GO:0005667(PANTHER)|GO:0045944(PANTHER)
Lac5g2905 851 MobiDBLite consensus disorder prediction 735 752 - -
Lac5g2905 851 MobiDBLite consensus disorder prediction 771 811 - -
Lac5g2905 851 MobiDBLite consensus disorder prediction 735 826 - -
Lac5g2905 851 Pfam LIM-domain binding protein 294 554 IPR029005 -
Lac5g2905 851 Coils Coil 249 276 - -
Lac5g2905 851 MobiDBLite consensus disorder prediction 636 722 - -
Lac5g2905 851 MobiDBLite consensus disorder prediction 140 164 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g2905 Lac-Chr5:47221808 Lac8g1749 Lac-Chr8:35735992 2.00E-94 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2905 - - - 0.0