Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2914 ATGGTTTTTCATATGGGTATGGAGTTGAAACGCTTTGTTTTCATTTTCATCGTCTCCTTCGAGCTCTGCATTTTGAGCTCCAATGGCGTAACAGACCAGAATGAGATTATTATCGAGAGGGAAAGCTTGATTTCTTTCAAAGCTTCGCTAGAGACCTCAGAAATTCTGCTATGGAACTCATCGGTTCCTCACTGTTTATGGGCCGGAGTTTCTTGCCGACTCGGTCGAGTTACAGAGCTCTCTCTTTCAGCTCTTTCGCTCAAAGGCCGACTCTCTGCTTCCCTTTTCAACATTTTGAGCCTCTCTGTTCTTGACCTTTCAAACAACTTCCTCTATGGCTCAATCCCACGTCAGATATCCAATCTTCGGAGCTTGAAGGTGCTCGCTCTCGGCCAAAATCAGTTTTCCGGCGACTTCCCTATCGAACTCACTGAGTTGACTCAGCTGGAGAATCTCAAGCTGGGGACTAATTTATTCACAGGTAAAATCCCTCCGGAGCTTGGAAATTTGAAGCTGCTACGGACCCTTGACCTCTCCGGCAATGCCTTCGTCGGAAATGTTCCAGCCCACATCGGAAATTTGACGAGGATTTTTTCCTTGGACCTTGGCAACAATCTTTTATCAGGTCCACTCCCATTGACCATCTTCACCGAGCTGAAATCTTTAACTTCTTTGGATATTTCGAACAACTCGTTTTCTGGTTCAATCCCACCTGAAATTGGTAATCTAGAGCATTTGACTGACCTTTACATCGGCATTAACCACTTTTCCGGTGCGTTGCCGCCTGAAGTTGGTAACCTCGTATTGCTCGAGAACTTTTTTTCGCCTTCTTGTTCTCTAACTGGTCCATTGCCTGAAGAACTATCCAAGTTGAAATCATTGAGCAAGCTGGACATTTCATACAATCCACTTGGGTGTTCTATCCCGAAATCGATTGGTGAGTTACAGAACTTGACTATACTGAATCTGGTTTACACCGAGCTTAATGGTTCAATTCCTGCTGAGATTGGGAAGTGCAGAAATTTGAAGACATTGATGCTTTCATTCAACTTTCTATCTGGGGTGTTGCCACAAGAGCTTTCAGAGCTTCCCATATTGACATTTTCGGCTGAGAGGAATCAGCTTTCTGGGCCATTGCCTTCCTGGCTTGGCAAATGGAAAGATGTCGATTCTGTTTTGCTCTCGAGTAATCGGTTTACTGGGGAAATCCCACCTGAGATTGGAAATTGCTCGATGCTTACGCACCTTAGTTTGAGCAATAACTTGTTGACAGGTCCAATACCTAAAGAAATTTGTAATGCTGCATCCTTGATGGAGATTGATCTTGACAGTAATTTCCTTTCGGGTACGATTGACGACAAGTTTGTGCTGTGTGGAAATCTTACACAGTTGGTTTTGGTAGACAATCAGATTGTTGGTACTATACCAGAGTATTTCTCAGACCTTCCCCTACTGGTAATCAACCTCGACTCTAATAACTTTACTGGTTCATTACCGAGAAGTATATGGAACTCAGTGGATTTGATGGAATTTTCTGCTGCAAATAACCGGTTGGAGGGTCATCTCCCTTCAGAAATTGGTTATGCAGCTTCACTTCAGAGGCTTGTTCTCAGCAATAATAGGTTGACAGGCACAATACCAGATGAGATTGGAAATCTCACAAACCTATCTGTTCTAAATTTGAATTCAAATCTGCTTGAAGGAGCTATTCCAGCTATGCTTGGAGATTGCAGTGCACTTACTACGTTGGACCTTGGAAACAACAGTCTAAATGGGTCGATACCGGAAAGGCTTGCAGACCTTGCTGAATTACAGTGCCTGGTTCTTTCTTACAACAAGTTATCTGGAGCAATACCTTCCAAGCCGTCTGCTTATTTTCAACAGGTGACTATTCCTGATTTGAGCTTTGTTCAGCATCATGGTGTTTTTGATCTATCTCATAATAGATTGTCTGGTACCATACCTGATGAACTGGGGAAGTGTGTTGTAGTGGTGGATCTTTTACTGAATGATAATCTGCTTTCTGGAGAAATTCCCAGATCTCTCTCCCACTTAACAAACTTGACAACCTTGGATTTGTCTGGCAATATGCTTACTGGTCCTATTCCCGCAGAGATCGGCGATGCTCTCAAGCTCCAAGGCCTGTATCTTGGGAGTAATCACCTCATGGGAACGATCCCCGAGAGCTTGAGTCATTTGAGTAGCTTGGTAAAGTTGAACTTAACTGGTAATAAATTATCTGGTTCAGTTCCAAAAAGTCTTGGTGTTCTGAAAGCTTTAACTCATTTGGATTTAAGTTCTAATGAGTTGGATGGTGATCTTCCTTCTTCTCTGTCCAGCATGTTGAATCTTGTGGGGCTATATGTACAGGAGAACAGGCTTTCTGGTCAGGTTGTTGAACTTTTCCCAAGTTCCATGACATGGAAGATTGAAATTTTGAATTTGAGTAATAACTATTTCGAGGGCGTACTTCCACGAACATTGGGCAACCTTTCATACTTGACAACTTTGGATCTTCATGGAAATAAGTTCACAGGACCAATCCCTTCAGATCTTGGGGATCTTATGCAACTTGAGTACTTTGATGTTTCTCAAAACAGGCTGTCTGGAGAGATTCCAGAGAAAATATGCAGCCTGATCAACATGTTTTACCTGAATTTGGCAGAAAACAGTCTAGAAGGGCAAATTCCAAGAAGTGGCATTTGCCAGAATCTATCCAAAAGCTCACTTGTCGGTAACAAGGACCTTTGTGGGAGAATCATGGGTTTCAATTGCAAGATCAAAACTTTAGAGAGATCTGCAGTCTTGAATGCTTGGAGCGTTGCTGGGATTATCGTTGTAAGTGTTCTTATCATTCTTACCGTGGCATTCGCCATGCGGAAACAGATTACTAGAAGGCACAGAGATATTGATCCGGAGGAAATGGAGGCAAGCAAATTAAACAGTTTCATAGACCCCAATCTCTATTTCTTAAGCAGCAGCAGATCGAAAGAGCCTTTGAGCATCAATGTGGCGATGTTCGAGCAGCCTCTTCTGAAGTTAACTTTGGTTGATATCCTTGAAGCAACCAATAACTTCTGTAAAACAAACATTATTGGAGATGGAGGATTTGGGACTGTGTACAAGGCCACTTTGCCTGATGGAAAAATTGTTGCTGTGAAGAAACTAAGTGAAGCAAAAACACAGGGGCACAGAGAATTTTTTGCTGAAATGGAAACTCTAGGCAAAGTAAAGCACAATAATCTTGTTCCACTGCTTGGCTACTGCTCTCTTGGGGAGGAGAAGCTCCTTGTCTATGAGTATATGGTGAATGGTAGCTTGGATCTTTGGCTGAGAAACCGAACCGGTACTCTTGAAGTCCTTAACTGGGAGACTCGCTTCAAAGTCGCCTCAGGCGCAGCCCGTGGACTGGCATTTCTTCACCATGGATTCATCCCCCACATCATTCATAGGGATGTCAAAGCAAGCAACATACTCCTCAATGAAGACTTTGAACCAAAAGTTGCTGACTTTGGATTGGCCAGACTGATCAGTGCCTGTGAGACTCATGTCACAACTGAGATTGCTGGAACCTTTGGTTACATTCCACCTGAGTACGGGCAGAGCGGGAGGTCGACTACGAAAGGAGACGTTTATAGCTTCGGTGTGATCCTGCTGGAATTGGTAACAGGAAAGGAACCAACTGGACCTGACTTCAAAGAGATTGAAGGTGGAAATCTGGTTGGTTGGGTGTTTCAGAAGATCAAGAAGGGTCAAGCTGCAGACGTTCTCGACTCGACCGTTCTAAATGCTGATTCGAAACATATGATGCTGCAAACTCTTCAGATTGCTTGTGTCTGCCTGTCTGAAAATCCAGCAAACAGGCCTTCCATGCTTCAGGTATTGAAGTTTCTCAAAGGGATAAAAGATGAGTAA 3915 43.35 MVFHMGMELKRFVFIFIVSFELCILSSNGVTDQNEIIIERESLISFKASLETSEILLWNSSVPHCLWAGVSCRLGRVTELSLSALSLKGRLSASLFNILSLSVLDLSNNFLYGSIPRQISNLRSLKVLALGQNQFSGDFPIELTELTQLENLKLGTNLFTGKIPPELGNLKLLRTLDLSGNAFVGNVPAHIGNLTRIFSLDLGNNLLSGPLPLTIFTELKSLTSLDISNNSFSGSIPPEIGNLEHLTDLYIGINHFSGALPPEVGNLVLLENFFSPSCSLTGPLPEELSKLKSLSKLDISYNPLGCSIPKSIGELQNLTILNLVYTELNGSIPAEIGKCRNLKTLMLSFNFLSGVLPQELSELPILTFSAERNQLSGPLPSWLGKWKDVDSVLLSSNRFTGEIPPEIGNCSMLTHLSLSNNLLTGPIPKEICNAASLMEIDLDSNFLSGTIDDKFVLCGNLTQLVLVDNQIVGTIPEYFSDLPLLVINLDSNNFTGSLPRSIWNSVDLMEFSAANNRLEGHLPSEIGYAASLQRLVLSNNRLTGTIPDEIGNLTNLSVLNLNSNLLEGAIPAMLGDCSALTTLDLGNNSLNGSIPERLADLAELQCLVLSYNKLSGAIPSKPSAYFQQVTIPDLSFVQHHGVFDLSHNRLSGTIPDELGKCVVVVDLLLNDNLLSGEIPRSLSHLTNLTTLDLSGNMLTGPIPAEIGDALKLQGLYLGSNHLMGTIPESLSHLSSLVKLNLTGNKLSGSVPKSLGVLKALTHLDLSSNELDGDLPSSLSSMLNLVGLYVQENRLSGQVVELFPSSMTWKIEILNLSNNYFEGVLPRTLGNLSYLTTLDLHGNKFTGPIPSDLGDLMQLEYFDVSQNRLSGEIPEKICSLINMFYLNLAENSLEGQIPRSGICQNLSKSSLVGNKDLCGRIMGFNCKIKTLERSAVLNAWSVAGIIVVSVLIILTVAFAMRKQITRRHRDIDPEEMEASKLNSFIDPNLYFLSSSRSKEPLSINVAMFEQPLLKLTLVDILEATNNFCKTNIIGDGGFGTVYKATLPDGKIVAVKKLSEAKTQGHREFFAEMETLGKVKHNNLVPLLGYCSLGEEKLLVYEYMVNGSLDLWLRNRTGTLEVLNWETRFKVASGAARGLAFLHHGFIPHIIHRDVKASNILLNEDFEPKVADFGLARLISACETHVTTEIAGTFGYIPPEYGQSGRSTTKGDVYSFGVILLELVTGKEPTGPDFKEIEGGNLVGWVFQKIKKGQAADVLDSTVLNADSKHMMLQTLQIACVCLSENPANRPSMLQVLKFLKGIKDE 1304
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 47292775 47296689 + Lag0019998.1 Lac5g2914 609556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2914 1304 Gene3D Ribonuclease Inhibitor 199 367 IPR032675 -
Lac5g2914 1304 Gene3D Ribonuclease Inhibitor 627 927 IPR032675 -
Lac5g2914 1304 SMART serkin_6 1026 1298 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac5g2914 1304 Gene3D Ribonuclease Inhibitor 433 508 IPR032675 -
Lac5g2914 1304 Gene3D Ribonuclease Inhibitor 368 432 IPR032675 -
Lac5g2914 1304 FunFam Uncharacterized protein 367 631 - -
Lac5g2914 1304 SUPERFAMILY L domain-like 634 918 - -
Lac5g2914 1304 Gene3D Ribonuclease Inhibitor 37 190 IPR032675 -
Lac5g2914 1304 PRINTS Leucine-rich repeat signature 685 698 - -
Lac5g2914 1304 PRINTS Leucine-rich repeat signature 222 235 - -
Lac5g2914 1304 FunFam Leucine-rich repeat receptor-like protein kinase 38 189 - -
Lac5g2914 1304 SMART LRR_sd22_2 855 881 - -
Lac5g2914 1304 SMART LRR_sd22_2 219 245 - -
Lac5g2914 1304 SMART LRR_sd22_2 291 317 - -
Lac5g2914 1304 SMART LRR_sd22_2 685 717 - -
Lac5g2914 1304 SMART LRR_sd22_2 98 124 - -
Lac5g2914 1304 SMART LRR_sd22_2 577 603 - -
Lac5g2914 1304 SMART LRR_sd22_2 757 786 - -
Lac5g2914 1304 Pfam Leucine Rich Repeat 393 410 IPR001611 GO:0005515(InterPro)
Lac5g2914 1304 Pfam Leucine Rich Repeat 293 315 IPR001611 GO:0005515(InterPro)
Lac5g2914 1304 Pfam Leucine Rich Repeat 221 243 IPR001611 GO:0005515(InterPro)
Lac5g2914 1304 Pfam Leucine Rich Repeat 173 194 IPR001611 GO:0005515(InterPro)
Lac5g2914 1304 Pfam Leucine Rich Repeat 760 781 IPR001611 GO:0005515(InterPro)
Lac5g2914 1304 Pfam Leucine Rich Repeat 413 433 IPR001611 GO:0005515(InterPro)
Lac5g2914 1304 Pfam Leucine Rich Repeat 687 707 IPR001611 GO:0005515(InterPro)
Lac5g2914 1304 Pfam Leucine Rich Repeat 100 122 IPR001611 GO:0005515(InterPro)
Lac5g2914 1304 Pfam Leucine Rich Repeat 735 756 IPR001611 GO:0005515(InterPro)
Lac5g2914 1304 Pfam Leucine Rich Repeat 643 661 IPR001611 GO:0005515(InterPro)
Lac5g2914 1304 Pfam Leucine Rich Repeat 341 363 IPR001611 GO:0005515(InterPro)
Lac5g2914 1304 Pfam Leucine Rich Repeat 711 733 IPR001611 GO:0005515(InterPro)
Lac5g2914 1304 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 685 1302 IPR051564 GO:0016020(PANTHER)
Lac5g2914 1304 FunFam serine/threonine-protein kinase BRI1-like 2 988 1101 - -
Lac5g2914 1304 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1148 1160 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac5g2914 1304 FunFam serine/threonine-protein kinase BRI1-like 2 1102 1304 - -
Lac5g2914 1304 SUPERFAMILY L domain-like 59 367 - -
Lac5g2914 1304 SUPERFAMILY Protein kinase-like (PK-like) 1007 1298 IPR011009 -
Lac5g2914 1304 ProSitePatterns Protein kinases ATP-binding region signature. 1032 1055 IPR017441 GO:0005524(InterPro)
Lac5g2914 1304 Gene3D Transferase(Phosphotransferase) domain 1 1102 1304 - -
Lac5g2914 1304 SMART LRR_typ_2 553 577 IPR003591 -
Lac5g2914 1304 SMART LRR_typ_2 757 781 IPR003591 -
Lac5g2914 1304 SMART LRR_typ_2 831 855 IPR003591 -
Lac5g2914 1304 SMART LRR_typ_2 291 315 IPR003591 -
Lac5g2914 1304 SMART LRR_typ_2 170 194 IPR003591 -
Lac5g2914 1304 SMART LRR_typ_2 219 243 IPR003591 -
Lac5g2914 1304 SMART LRR_typ_2 733 756 IPR003591 -
Lac5g2914 1304 SMART LRR_typ_2 98 122 IPR003591 -
Lac5g2914 1304 SMART LRR_typ_2 685 709 IPR003591 -
Lac5g2914 1304 Pfam Protein tyrosine and serine/threonine kinase 1030 1297 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac5g2914 1304 Pfam Leucine rich repeat N-terminal domain 39 72 IPR013210 -
Lac5g2914 1304 ProSiteProfiles Protein kinase domain profile. 1026 1304 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac5g2914 1304 Gene3D Ribonuclease Inhibitor 509 626 IPR032675 -
Lac5g2914 1304 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 633 929 - -
Lac5g2914 1304 Gene3D Phosphorylase Kinase; domain 1 989 1101 - -
Lac5g2914 1304 SUPERFAMILY L domain-like 369 634 - -
Lac5g2914 1304 FunFam leucine-rich repeat receptor protein kinase EMS1 217 366 - -
Lac5g2914 1304 Pfam Leucine rich repeat 810 868 IPR001611 GO:0005515(InterPro)
Lac5g2914 1304 Pfam Leucine rich repeat 531 590 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g0212 Lac-Chr3:1520628 Lac5g2914 Lac-Chr5:47292775 4.40E-65 dispersed
Lac3g0586 Lac-Chr3:4529247 Lac5g2914 Lac-Chr5:47292775 1.60E-64 dispersed
Lac4g0504 Lac-Chr4:11664690 Lac5g2914 Lac-Chr5:47292775 9.10E-66 dispersed
Lac5g2452 Lac-Chr5:43123432 Lac5g2914 Lac-Chr5:47292775 1.60E-77 dispersed
Lac5g2914 Lac-Chr5:47292775 Lac8g2195 Lac-Chr8:40251030 4.20E-91 dispersed
Lac7g1197 Lac-Chr7:11096345 Lac5g2914 Lac-Chr5:47292775 1.10E-49 dispersed
Lac8g2054 Lac-Chr8:39039156 Lac5g2914 Lac-Chr5:47292775 5.20E-60 dispersed
Lac5g2914 Lac-Chr5:47292775 Lac1g2432 Lac-Chr1:45792759 1.60E-90 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86230 PF07714 PK_Tyr_Ser-Thr 1.90E-46 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2914 - - - 0.0