Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac5g2937 | ATGGCAAAGTTCATGGTGGAGTCCACCACTGAAATGCTAAACAAGTGGAGCAGCCTCGTAAACTCCGCCCAACCGGAAATCGACGTGGAGAGAGAAATCACGGCCACCGCCGGCGACATTATCGCTCAGGCCAGCTTCGGAATTTCTAACGGCGGCGGCCGGGACGCCTTCAACAGTCTCAGAGCTCTTCAATTCACTCTCTTCCAAAACAGCACTTACGTCGGAGTTCCTTTCAGCGGCCTCTTTCTCTGCCCGGCCCGAACCCTAGCCGCCAAGCGACTCGGCGCCGAAATCGATCGCCTCTTTTTATCGGTCATATCGGAAAGGAAACAGTCGGAGGAAAATTCTTCTTCCTCCGATTTGCTCAGCCGGTTGATCGAGAGTCAGAGGAACGGCAGCGGCGGCGGCAAGATGAGGCTGACGACGAGAGAACTGGTGGACGAGTGCAAGACTTTCTTCTTTGGCGGCCACGAGACGACGGCGCTGGCGATCAGTTGGACGCTGCTGCTGCTGGCGACGCGGCCGGAGTGGCAGAACATTTTACGGCAGGAGATTAAAGAAGTCATCGGAGATAAAGAGATTGATTTCGCCATGCTTTCTCGACTCAAAAAGATGGGATGGGTGTTCAATGAGGTACTTAGGCTATATCCATCAGCCCCAAACATACAAAGACAAGCAAAAGGAGACATCAAAGTCGGCGACGTGACGATCCCAAAAGGGACCAACATATGGATAGACGTTGTATCGATGCATCACGACCCGACCCTTTGGGGTGAGGACGTTAACGAGTTCAAGCCCGAGCGGTTCGAGAAGGACAGCATTCATGGCGGGTGCAACCACAAGATGGGATATTTGCCATTTGGTTTTGGAGGGAGAATGTGCATTGGTAGAAACTTGTCCTCTATGGAGTATAAGATTGTGCTAACCCTAATTCTCTCTAGGTTTTCACTCTCTCTTTCTCCATCCTATTCTCATTCTCCTGCTATTTTGCTCTCTTTGAGACCTGCCCATGGCCTCCCTCTCATTGTAAAGCCCCTCCAACCTTAA | 1047 | 51.77 | MAKFMVESTTEMLNKWSSLVNSAQPEIDVEREITATAGDIIAQASFGISNGGGRDAFNSLRALQFTLFQNSTYVGVPFSGLFLCPARTLAAKRLGAEIDRLFLSVISERKQSEENSSSSDLLSRLIESQRNGSGGGKMRLTTRELVDECKTFFFGGHETTALAISWTLLLLATRPEWQNILRQEIKEVIGDKEIDFAMLSRLKKMGWVFNEVLRLYPSAPNIQRQAKGDIKVGDVTIPKGTNIWIDVVSMHHDPTLWGEDVNEFKPERFEKDSIHGGCNHKMGYLPFGFGGRMCIGRNLSSMEYKIVLTLILSRFSLSLSPSYSHSPAILLSLRPAHGLPLIVKPLQP | 348 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 47435976 | 47437517 | + | Lag0020021.1 | Lac5g2937 | 609579 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac5g2937 | 348 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 287 | 296 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lac5g2937 | 348 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 1 | 340 | IPR050665 | GO:0004497(PANTHER) | |
| Lac5g2937 | 348 | PRINTS | E-class P450 group I signature | 164 | 190 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac5g2937 | 348 | PRINTS | E-class P450 group I signature | 294 | 317 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac5g2937 | 348 | PRINTS | E-class P450 group I signature | 144 | 161 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac5g2937 | 348 | PRINTS | E-class P450 group I signature | 284 | 294 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac5g2937 | 348 | SUPERFAMILY | Cytochrome P450 | 2 | 345 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac5g2937 | 348 | Gene3D | Cytochrome P450 | 1 | 345 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac5g2937 | 348 | Pfam | Cytochrome P450 | 2 | 322 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac5g2937 | 348 | PRINTS | P450 superfamily signature | 207 | 218 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac5g2937 | 348 | PRINTS | P450 superfamily signature | 285 | 294 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac5g2937 | 348 | PRINTS | P450 superfamily signature | 294 | 305 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac5g2937 | 348 | PRINTS | P450 superfamily signature | 155 | 172 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac5g2937 | Lac-Chr5:47435976 | Lac8g2821 | Lac-Chr8:45447759 | 5.20E-65 | dispersed | |
| Lac5g2937 | Lac-Chr5:47435976 | Lac11g0028 | Lac-Chr11:247461 | 4.20E-123 | transposed |
Pathway information