Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2937 ATGGCAAAGTTCATGGTGGAGTCCACCACTGAAATGCTAAACAAGTGGAGCAGCCTCGTAAACTCCGCCCAACCGGAAATCGACGTGGAGAGAGAAATCACGGCCACCGCCGGCGACATTATCGCTCAGGCCAGCTTCGGAATTTCTAACGGCGGCGGCCGGGACGCCTTCAACAGTCTCAGAGCTCTTCAATTCACTCTCTTCCAAAACAGCACTTACGTCGGAGTTCCTTTCAGCGGCCTCTTTCTCTGCCCGGCCCGAACCCTAGCCGCCAAGCGACTCGGCGCCGAAATCGATCGCCTCTTTTTATCGGTCATATCGGAAAGGAAACAGTCGGAGGAAAATTCTTCTTCCTCCGATTTGCTCAGCCGGTTGATCGAGAGTCAGAGGAACGGCAGCGGCGGCGGCAAGATGAGGCTGACGACGAGAGAACTGGTGGACGAGTGCAAGACTTTCTTCTTTGGCGGCCACGAGACGACGGCGCTGGCGATCAGTTGGACGCTGCTGCTGCTGGCGACGCGGCCGGAGTGGCAGAACATTTTACGGCAGGAGATTAAAGAAGTCATCGGAGATAAAGAGATTGATTTCGCCATGCTTTCTCGACTCAAAAAGATGGGATGGGTGTTCAATGAGGTACTTAGGCTATATCCATCAGCCCCAAACATACAAAGACAAGCAAAAGGAGACATCAAAGTCGGCGACGTGACGATCCCAAAAGGGACCAACATATGGATAGACGTTGTATCGATGCATCACGACCCGACCCTTTGGGGTGAGGACGTTAACGAGTTCAAGCCCGAGCGGTTCGAGAAGGACAGCATTCATGGCGGGTGCAACCACAAGATGGGATATTTGCCATTTGGTTTTGGAGGGAGAATGTGCATTGGTAGAAACTTGTCCTCTATGGAGTATAAGATTGTGCTAACCCTAATTCTCTCTAGGTTTTCACTCTCTCTTTCTCCATCCTATTCTCATTCTCCTGCTATTTTGCTCTCTTTGAGACCTGCCCATGGCCTCCCTCTCATTGTAAAGCCCCTCCAACCTTAA 1047 51.77 MAKFMVESTTEMLNKWSSLVNSAQPEIDVEREITATAGDIIAQASFGISNGGGRDAFNSLRALQFTLFQNSTYVGVPFSGLFLCPARTLAAKRLGAEIDRLFLSVISERKQSEENSSSSDLLSRLIESQRNGSGGGKMRLTTRELVDECKTFFFGGHETTALAISWTLLLLATRPEWQNILRQEIKEVIGDKEIDFAMLSRLKKMGWVFNEVLRLYPSAPNIQRQAKGDIKVGDVTIPKGTNIWIDVVSMHHDPTLWGEDVNEFKPERFEKDSIHGGCNHKMGYLPFGFGGRMCIGRNLSSMEYKIVLTLILSRFSLSLSPSYSHSPAILLSLRPAHGLPLIVKPLQP 348
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 47435976 47437517 + Lag0020021.1 Lac5g2937 609579
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2937 348 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 287 296 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lac5g2937 348 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 340 IPR050665 GO:0004497(PANTHER)
Lac5g2937 348 PRINTS E-class P450 group I signature 164 190 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g2937 348 PRINTS E-class P450 group I signature 294 317 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g2937 348 PRINTS E-class P450 group I signature 144 161 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g2937 348 PRINTS E-class P450 group I signature 284 294 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g2937 348 SUPERFAMILY Cytochrome P450 2 345 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g2937 348 Gene3D Cytochrome P450 1 345 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g2937 348 Pfam Cytochrome P450 2 322 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g2937 348 PRINTS P450 superfamily signature 207 218 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g2937 348 PRINTS P450 superfamily signature 285 294 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g2937 348 PRINTS P450 superfamily signature 294 305 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g2937 348 PRINTS P450 superfamily signature 155 172 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g2937 Lac-Chr5:47435976 Lac8g2821 Lac-Chr8:45447759 5.20E-65 dispersed
Lac5g2937 Lac-Chr5:47435976 Lac11g0028 Lac-Chr11:247461 4.20E-123 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2937 - - - 0.0