Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2938 ATGAATCCGGCCGCCGTCGAAGCTCCGTTCATAGTTCTGTTTCTGCTTGCCGCAGCGCTGCCGTGGCCGCCGCTCGCCGGAGCGCGGCTTCTGGTGGAGATGACGGTGGTTCGCGACGCCTCTGCCATTGGAGCCTTTTGTTTGGACGGAAGCTTGCCGGCGTACCACCTGGACAGAGGATTCGGCGCCGGAGCGGGAAACTGGCTTCTACAGTTCGAGGGTGGTGGGTGGTGCAATGATTTAAAGTCTTGTTTGGAAAGAGCCAATACTCGAAGAGGATCAACGCGTTTGATGACCAAATGGGAAGACTTCAATGGCATTCTTAGCAATAATGCATCTCTAAACCCAGATTTTTATAACTGGAACCGAGTGAAACTCAGGTATTGTGATGGAGCCTCATTTGGAGGAGATGCCTTGTTTGACAATGGGACGTCAGTGCTTTATTTCAAAGGGCAAAAGATATGGGAATCCATCATTCTTGACCTTCTACCAAAAGGATTGGGGACAGCAAGGAAGGCTTTGCTTTCTGGTTGCTCTGCTGGAGGCCTATCAACTTTTTTGCATTGTGAAAATTTCACCAACTATTTGCCAAAGAATGCCACTGTCAAATGCTTGAGTGATGCTGGCTTTTTTCTTGACTTAAGAGATATAGGTTTAAACCACACCATGAGGAACTTCTACAAGGATCTTGTGGCTCTGCAGGGGATGGAGCCAAATCTCAATGGAAACTGCACAGCCTCTTCTTACTTTCCAGATTTGTGCATATTCCCACAGTATTCATTGAAGTACATAACAACACCATTTTTCATTCTGAATTCAGCATATGATGTTTACCAATTTCATCATGGATTGGTGCCACCATCTGCTGATTTACATGGACATTGGAATCACTGCAAACTCAATCCAGCTGAGTGTAGTCCACAGCAGATTGAGGTACTGCAAGGTCTAAGAATGAGCATGCTTTCTGCATTAAGATTATTCTATGAATATTCAAGCAGAGGAGGAATGTTCATAAATTCATGTTTTGCTCATTGCCAAAGTGAGTCACAAGACACATGGTTTGCAGAGGACTCCCCAACAATAGACAACAAGACTATAGCAGAAGCAGTTGGAGATTGGTACTTTAACAGAAGGAACATAAAGGAGATTGATTGTGCTTATCCATGTGACTCTACTTGCCATAATCTTATACCATAA 1197 44.78 MNPAAVEAPFIVLFLLAAALPWPPLAGARLLVEMTVVRDASAIGAFCLDGSLPAYHLDRGFGAGAGNWLLQFEGGGWCNDLKSCLERANTRRGSTRLMTKWEDFNGILSNNASLNPDFYNWNRVKLRYCDGASFGGDALFDNGTSVLYFKGQKIWESIILDLLPKGLGTARKALLSGCSAGGLSTFLHCENFTNYLPKNATVKCLSDAGFFLDLRDIGLNHTMRNFYKDLVALQGMEPNLNGNCTASSYFPDLCIFPQYSLKYITTPFFILNSAYDVYQFHHGLVPPSADLHGHWNHCKLNPAECSPQQIEVLQGLRMSMLSALRLFYEYSSRGGMFINSCFAHCQSESQDTWFAEDSPTIDNKTIAEAVGDWYFNRRNIKEIDCAYPCDSTCHNLIP 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 47439695 47450615 - Lag0020022.1 Lac5g2938 609580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2938 398 PANTHER NOTUM-RELATED 28 396 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
Lac5g2938 398 Pfam Pectinacetylesterase 29 378 IPR004963 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g2285 Lac-Chr5:41537541 Lac5g2938 Lac-Chr5:47439695 1.20E-108 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2938 K19882 - csv:101216160 756.518