Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2972 ATGGCGGCCGGCCTCTCCGCCGCCTTAGGGCCCAAACCACTCCATCTCTTCCTAACTTCCTCCAATCTCTCTCCTAAACCTCGAACTCCGTTTCTGTTTCCACCTTCAGTCCTCCGGAGCAGTAGAATCCAATGGAAGATGCGGAGAAAACCGCTGCTCACCGTCTGTGTGCTCGTTGAGGATCAGAATAGTTCCGGCGAGGTGGAGAATCTCGCCAATGAAGGATCGCCGATTGTAGTCCCTCAGATCCCGTCGCCTCATGTTGCAGAGAAATTGGCGAGGAAGAGATCGGAGCGCTTCACTTATCTTGTTGCCGCGGTGATGTCTAGTTTTGGAATTACTTCCATGGCTATCATGGCTGTTTACTACCGATTTTACTGGCAAATGGAGGGCGGAGAGATTCCTTTCTCAGAAATGTTCGGTACATTTTCTCTATCCGTTGGTGCCGCTGTCGGCATGGAGTTTTGGGCAAGATGGGCGCATAGGGCACTCTGGCACGCTTCCTTGTGGCATATGCACGAGTCGCACCATAAACCAAGAGAAGGACCGTTCGAACTGAACGATGTCTTCGCCATTATCAACGCCGTGCCCGCCATAGCTCTTCTCTCTTACGGGTTCTTCCATAAAGGCCTCGTCCCTGGTCTCTGCTTCGGCGCTGGCCTTGGAATTACAGTGTTTGGGATGGCCTACATGTTCGTCCACGACGGTCTCGTTCACAAAAGATTCCCTGTGGGTCCCATTGCCAACGTGCCCTATTTCAGAAAGGTTGCTGCTGCTCACAAGCTTCACCATTCGGACAAGTTCAACGGTGTGCCCTACGGGCTGTTTTTGGGTCCGAAGGAATTAGAGGAAGTGGGAGGCTTAGAAGAATTGGAGAAGGAAATCAACAGAAGAATAAAATCAACGGCCACAAAATCAATCAACGGTTCTTGA 933 51.34 MAAGLSAALGPKPLHLFLTSSNLSPKPRTPFLFPPSVLRSSRIQWKMRRKPLLTVCVLVEDQNSSGEVENLANEGSPIVVPQIPSPHVAEKLARKRSERFTYLVAAVMSSFGITSMAIMAVYYRFYWQMEGGEIPFSEMFGTFSLSVGAAVGMEFWARWAHRALWHASLWHMHESHHKPREGPFELNDVFAIINAVPAIALLSYGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRKVAAAHKLHHSDKFNGVPYGLFLGPKELEEVGGLEELEKEINRRIKSTATKSINGS 310
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 47731516 47734305 - Lag0020056.1 Lac5g2972 609614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2972 310 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 7 302 IPR045019 GO:0009507(PANTHER)|GO:0010291(PANTHER)|GO:0016119(PANTHER)|GO:0016123(PANTHER)|GO:0016491(InterPro)
Lac5g2972 310 Pfam Fatty acid hydroxylase 149 277 IPR006694 GO:0005506(InterPro)|GO:0008610(InterPro)|GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g2058 Lac-Chr11:36375730 Lac5g2972 Lac-Chr5:47731516 2.30E-98 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2972 K15746 - csv:101212140 569.311