Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g3004 ATGGCCCTCGCCGTGCTCGACGCCCTCGACAACGCTCGGACCCAATGGTACCATGTCACGGCCATAGTGATCGCTGGGATGGGCTTCTTCACTGATGCCTACGATCTTTTCTGCATCTCGACCGTGTCGAAGCTTCTTGGCCGACTTTATTACTTCGATCCCGATAGTACGAAGCCCGGAAAACTTCCCAACGCGGTTAACAACGCGGTGATCGGAGTTGCGCTGGTCGGAACCCTATCGGGGCAGCTTTTCTTTGGGTGGTTGGGTGACAAACTTGGGAGGAAGAAAGTTTATGGTGTTACCCTAATTCTTATGGCCTTTTGTGCCATTTGCTCAGGGCTGTCTTTTGGGTCAACATCAAAATCAGTGATTGGTACACTTTGCTTCTTTAGATTTTGGCTTGGATTTGGCATTGGTGGCGATTATCCACTTTCAGCCACCATCATGTCTGAATATGCTAACAAAAAGACTCGAGGGGCTTTCATTGCAGCTGTCTTCGCCATGCAGGGTGTGGGGTTGGTTTTTGCAGGGCTAGTGTCAATGATTCTATCAAAAATCTTCCTCACCCTTCACGATGCTCCCTCCTACAAAAGCAACCATGTATTCTCCACACAACCTCAAGGAGACTTCCTATGGCGGATCGTGTTGATGCTTGGTGCTTTGCCAGCCATCTTGACTTACTATTGGCGCATGAAAATGCCTGAAACTGGCCGCTACACTGCCCTCATCGAAGGCAACGCCAAGCAAGCCGCCGCCGACATGGGAAAGGTCTTGGAGATCTCAATCCAAGCTGACCAAGACAAGCTTTCCCATTTCAAATCTGTCAATGAATATGGCTTGCTCTCCAAAGAGTTCTTCCACCGCCACGGCCTCCACTTGATCGGCACCACCACCACTTGGTTCTTGCTCGACATTGCCTTCTACAGCAATAACCTCACTCAAAAGGACATCTTCCCGGCCATGAACTTGACCAAGAAAGCCGAGGAGGTCAATGCTTTGGAGGAAGTTTACGAGACATCCAAGGCCATGTTTCTCGTTGCCTTGCTTGGGACCTTCCCTGGCTATTGGTTCACCGTCTTCCTCATTGAGAAGCTTGGGAGGTTCAAAATCCAGCTCATTGGATTCTTCATGATGTCTGTTTTCATGGCGGTCCTCGGCGTTCGCTACAACTATTTGAAGCATCATCCGGCCGAGTTCGCCGTGCTTTATGGCTTGACGTTCTTCTTCGCCAACTTCGGTCCGAATAGCACCACTTTTGTTCTTCCGGCCGAGCTCTTCCCGACTAGGGTTCGCTCGACGTGCCACGCGCTGAGTGCGGCGTCGGGGAAGGCCGGTGCGATCGTTGGAGCTTTTGGTGTGCAAAACTATACGCTGGATGGCGACCCTAGCAAGATTCAAAAGGCCATGATCTTCTTGGCCTTCACCAACATGCTAGGGTTTGTGTTTACGTTCTTGGTGACGGAGACGAAAGGCCGGTCGTTGGAGGAGATCTCCGGTGAGGACGGTGGCGGCGGCGGCGGCGAAAATGAAACTCAAATGCCTGTGAGAACCATGGGAAAGCCAGGAGCTCAAATGGAAGGTGAAATTTGA 1590 51.26 MALAVLDALDNARTQWYHVTAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYFDPDSTKPGKLPNAVNNAVIGVALVGTLSGQLFFGWLGDKLGRKKVYGVTLILMAFCAICSGLSFGSTSKSVIGTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGVGLVFAGLVSMILSKIFLTLHDAPSYKSNHVFSTQPQGDFLWRIVLMLGALPAILTYYWRMKMPETGRYTALIEGNAKQAAADMGKVLEISIQADQDKLSHFKSVNEYGLLSKEFFHRHGLHLIGTTTTWFLLDIAFYSNNLTQKDIFPAMNLTKKAEEVNALEEVYETSKAMFLVALLGTFPGYWFTVFLIEKLGRFKIQLIGFFMMSVFMAVLGVRYNYLKHHPAEFAVLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAASGKAGAIVGAFGVQNYTLDGDPSKIQKAMIFLAFTNMLGFVFTFLVTETKGRSLEEISGEDGGGGGGENETQMPVRTMGKPGAQMEGEI 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 47979062 47981561 - Lag0020088.1 Lac5g3004 609646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g3004 529 Pfam Sugar (and other) transporter 23 498 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Lac5g3004 529 SUPERFAMILY MFS general substrate transporter 9 498 IPR036259 -
Lac5g3004 529 Gene3D MFS general substrate transporter like domains 17 515 IPR036259 -
Lac5g3004 529 FunFam Inorganic phosphate transporter 1-6 17 510 - -
Lac5g3004 529 MobiDBLite consensus disorder prediction 495 529 - -
Lac5g3004 529 CDD MFS_PhT 22 490 - -
Lac5g3004 529 NCBIfam phosphate:H+ symporter 6 500 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
Lac5g3004 529 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 491 IPR020846 GO:0022857(InterPro)
Lac5g3004 529 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 6 496 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g3004 Lac-Chr5:47979062 Lac7g0591 Lac-Chr7:4729829 2.60E-185 dispersed
Lac5g3004 Lac-Chr5:47979062 Lac7g0590 Lac-Chr7:4710468 1.50E-188 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g3004 K08176 - csv:101210631 937.947