Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac5g3019 | ATGCTTCGAAAAGCTAACACTTTCTCTCTCCTTGCCTATCTCTCTCTCTCTCTCTCTCTTCTTTATCCCCCTTTTCTTTCCTGTGGCACCCTATTCCGCCTTGATTCTTCCAGTTTCTACCCTGAATGGGATCATCGTTTTGATGCCCGCCCATTTACTTTTCCCCTCATCCCTCTTGATCCAACCTCGAATGTTTCCGATTTTCCCATTATTCTTCCCATGGTATGCAGCTACAATATAAGGAATGTGATTGCTCAGGCTGGACATGTAGGAATAATCAGCAGAAGGGTTCAAATCATCAATATCTGGAGGAGTTTGCCTTCCAATTTTGGATTTGTTCACACTTGGAAGCGTGAGTATAGAACGAGTCTCATGATGATGGTCGATACGGGTGCATCGGAAAATCGCGGTCCGGTTGTTGATAAGCATCCTGAGAAAGATGAAGATGGTGGCTATGCCAGTGGAGGGTGGAAAAGTGACGATGGGAAACTTAGTTGGGGGTATTCAAGTTTCAGAGGGAAGAGGGCAACCATGGAAGATTTCTTTGATATTAAAATGTCGAAGGTTAATGGTCAAACGGTCTGCCTGTTTGGCATCTTTGATGGTCACGGTGGATCCCGTGCTGCAGAGTTTCTGAAGAATCATCTCTTTGAAAATCTCATGAAGCACCCAAAATTTTTGATGGATACCAAATTAGCTATCAGTGAAACGTATCAACAGACTGATGCTGAATTTTTAAATTCAGAAAAAGATACTTTAAGGGACGATGGCTCTACTGCTTCAACAGCTTTGCTAGTTGGCAATCATCTCTATGTTGCCAATGTTGGAGATTCGCGCACTATAATCTCAAAGGCGGGTGAAGCAATCCCTCTTTCTGAGGACCACAAACCGAATAGAACTGACGAGCGGAGGAGAATTGAAAATGCTGGGGGTGTTGTCATGTGGGCTGGCACTTGGAGGGTAGGAGGAGTGTTAGCAATGTCCCGTGCTTTCGGTAACAAGATGTTGAAACAGTTTGTCGTGGCAGATCCCGAGATTCAGGATCTTGAAGTAGACAAGGACATCGAGCTGCTCGTTCTCGCAAGCGATGGAGTTTGGGACGTGGTACGCAACGAGGATGCAGTGTTAGTTGCAGGAAAGGAAGAAGACCCCGAGGCAGCAGCTCGGAAGCTAACCAAAGCAGCGTTTACCCGGGGTAGCGCTGACAATATAACATGCATCGTGGTGAAGTTCCATCACGACAATGCAGGTCCTGCTACCGATACTCGAGAAAACAACTGA | 1281 | 45.9 | MLRKANTFSLLAYLSLSLSLLYPPFLSCGTLFRLDSSSFYPEWDHRFDARPFTFPLIPLDPTSNVSDFPIILPMVCSYNIRNVIAQAGHVGIISRRVQIINIWRSLPSNFGFVHTWKREYRTSLMMMVDTGASENRGPVVDKHPEKDEDGGYASGGWKSDDGKLSWGYSSFRGKRATMEDFFDIKMSKVNGQTVCLFGIFDGHGGSRAAEFLKNHLFENLMKHPKFLMDTKLAISETYQQTDAEFLNSEKDTLRDDGSTASTALLVGNHLYVANVGDSRTIISKAGEAIPLSEDHKPNRTDERRRIENAGGVVMWAGTWRVGGVLAMSRAFGNKMLKQFVVADPEIQDLEVDKDIELLVLASDGVWDVVRNEDAVLVAGKEEDPEAAARKLTKAAFTRGSADNITCIVVKFHHDNAGPATDTRENN | 426 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 48090074 | 48094092 | - | Lag0020103.1 | Lac5g3019 | 609661 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac5g3019 | 426 | ProSitePatterns | PPM-type phosphatase domain signature. | 196 | 204 | IPR000222 | GO:0043169(InterPro) | |
Lac5g3019 | 426 | Gene3D | - | 157 | 416 | IPR036457 | - | |
Lac5g3019 | 426 | SMART | PP2C_4 | 155 | 409 | IPR001932 | - | |
Lac5g3019 | 426 | Pfam | Protein phosphatase 2C | 169 | 404 | IPR001932 | - | |
Lac5g3019 | 426 | SUPERFAMILY | PP2C-like | 163 | 412 | IPR036457 | - | |
Lac5g3019 | 426 | CDD | PP2Cc | 167 | 411 | IPR001932 | - | |
Lac5g3019 | 426 | ProSiteProfiles | PPM-type phosphatase domain profile. | 165 | 411 | IPR001932 | - | |
Lac5g3019 | 426 | MobiDBLite | consensus disorder prediction | 135 | 154 | - | - | |
Lac5g3019 | 426 | FunFam | Probable protein phosphatase 2C 76 | 157 | 417 | - | - | |
Lac5g3019 | 426 | PANTHER | PROTEIN PHOSPHATASE | 148 | 410 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Lac5g3019 | 426 | MobiDBLite | consensus disorder prediction | 136 | 154 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac2g0725 | Lac-Chr2:5585682 | Lac5g3019 | Lac-Chr5:48090074 | 3.70E-53 | dispersed | |
Lac3g0450 | Lac-Chr3:3427757 | Lac5g3019 | Lac-Chr5:48090074 | 9.40E-26 | dispersed | |
Lac5g0780 | Lac-Chr5:10381177 | Lac5g3019 | Lac-Chr5:48090074 | 5.10E-10 | dispersed | |
Lac5g2701 | Lac-Chr5:45472452 | Lac5g3019 | Lac-Chr5:48090074 | 1.40E-48 | dispersed | |
Lac5g3019 | Lac-Chr5:48090074 | Lac8g1754 | Lac-Chr8:35770777 | 7.50E-90 | dispersed | |
Lac5g3019 | Lac-Chr5:48090074 | Lac5g3027 | Lac-Chr5:48155987 | 1.70E-33 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac5g3019 | K17506 | - | csv:101203681 | 674.085 |