Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g3083 ATGAGTTCGTTTGCACATGGAAAGAGCAGCAGGACTACTATCTTCTTGGTTTTCATTTCCTTTTTCACAGCTCTGAATGATCTGTGTACATTAGTCATTACTGCGGATGCCAAAAGCAATGTGTACATCGTTTATATGGGCAACAGACCACATGATAATGAAGAGCTGTTAGTAAAGACCCATCATGGAGTTCTTGCCTCTGTCCTTGGGAGCCAAGAAGCATCTGCAGATTCCCTGGTATATAACTATAAATATGGATTTTCTGGTTTTGCAGCAAAGCTTACCATGGCTCAAGCACAAATGATGTCAGAGTTGCCTTCAGTGATTAAAGTCATACCCAATCGTCTTCACAAGATGCAAACCACGAGGAGCTGGGACTACCTTCAACTCTCTCCACGATTTCCAAACTCTCTTCTACAGAAATCAAGAATGGGGAATGGGGCCATCATTGGCCTCCTTGATACAGGAATCTGGCCTGAATCTGAAGTTTTCTGTGATGACGGTCTAGGGCCTGTTCCCTCTAGGTGGAAGGGTATCTGCGAGCCAGGAGAGCTCTTCAATCCAGCAAAGGCTTGTAGCAGAAAACTAGTTGGAGCCCGATATTTCATCAAGGGGCTGGAAGCTGCATATGGACATCCTTTCAATAATACTGGGTTCCAAGATTACTTGTCCCCGAGAGATTACTCAGGACATGGCACACACGTCTCTTCAGTTGCTGGTGGCTCCTTTGTACCCAATGTTGGTTACCATGGCCTAGCTGTTGGAACAGTAAGGGGTGGTGCGCCCCAGTCTCGGCTTGCTATGTATAAAGTCTGTTGGCGACTGAATGGAGGTGTATGCTCAGACATAGACATTCTCAAGGCCATCGACCAAGCAATATATGATGGCGTAGATGTGCTATCTCTGTCCCTTGGTCCTACCTTTCCTTCATATTCTGATGTTGACATGCACGATGGGATTGCAATTGGCGCATTTCATGCTGTAGCGAAGGGTATAGCTGTTGTTGGTGCAGCAGGAAATTCTGGTCCAGCAGCTTACTCTGTAGCTAATATAGAACCATGGTTGTTGACAGTCGCTGCAAGTTCTGTGGATCGTTCATTCTTAGTAGCCATTACATTAGGAAACAACTGGACTACCATGGGACAAGGGATGTTCAGTGGAAAATTGACGAGGTTCCACAATCTAGTGTATCCTGAGGTCTCTGATCTTGATGATCCACGTGCATGCGAATCTCTATCCTTAAATGATACATGGGCAGCTGGAAATGTAGTTCTGTGTTTCGCATCAGATGATTATGATGACAATACACACGATACTTCTTGGTCCGTCAAAAAAGTTGGTGGGTTAGGGCTCATTGTTGCCAAGAATCCTACCAAGGCCGTCGAACCATTCATTGACAACTTCCCATGCGTTCAAATAAGCCTTGATGTTGGAATGCAGATACTCAACTATATTCGTTCTACCAGAAATCCTCAAGTCAAGATTGGTCCTTCAACGACACGTGTTGGTCAATCGTTGTCCACCACCGTGGCCTACTTTTCATCTCGAGGACCTAATTCAGTTGCTCCAGCAATACTGAAGCCAGATATTGCGGCTCCAGGCGTTGCTATTCTAGCTGCTGTTCCTCCCTCTGACCCAAAGGAAAGAAATTCTTATGCTTTTATTTCTGGGACATCCATGGCAACTCCTCATGTATCAGCCATTGTTGCCCTTCTCAAATCATTGCACTCTCATTGGTCTCCTGCTGCAATTAAGTCGGCCATTGTTACAACAGCCTGGACTTCGGATCCATATGGTGAAGTAATATTCGCAGAGGGACGTCCGATGAAGTCTGCCGGTCCTTTTGATTTTGGAGGTGGAATTGTGAACCCCAATAAAGCACTGGACCCCGGTCTTGTATATGACATGGGAATGGCAGACTATATTAAGTATTTTTGTGCCATGGGCCACAACAATTCTGCCATTTCTGGGATTACCAAGAGGTCCATAACTTGCCCCAAAAGACGACCATCTATTTTGGACATAAACGTGCCATCCATAACAATTCCTAGCCTTAGATACTCTGTAAACCTCACCAGAACTGTCATGAATGTGGGTTTAGTCAATTCAACATACAAGGCTGCCATTGTGCCCCCACCTGGCATAGCCATATTTGTAAAGCCTCGTATATTAAAATTCAACCACAAGATGGAGAGAATCTCCTTCACGGTTACTGTCTCTACTAATCACAGAGTGACAACCGGATACTGTTTCGGAAGCTTGACTTGGCTGGATGGAATTCATTCAGTTAGAATCCCAATATCTGTTAGAACTAACATTTGA 2322 44.88 MSSFAHGKSSRTTIFLVFISFFTALNDLCTLVITADAKSNVYIVYMGNRPHDNEELLVKTHHGVLASVLGSQEASADSLVYNYKYGFSGFAAKLTMAQAQMMSELPSVIKVIPNRLHKMQTTRSWDYLQLSPRFPNSLLQKSRMGNGAIIGLLDTGIWPESEVFCDDGLGPVPSRWKGICEPGELFNPAKACSRKLVGARYFIKGLEAAYGHPFNNTGFQDYLSPRDYSGHGTHVSSVAGGSFVPNVGYHGLAVGTVRGGAPQSRLAMYKVCWRLNGGVCSDIDILKAIDQAIYDGVDVLSLSLGPTFPSYSDVDMHDGIAIGAFHAVAKGIAVVGAAGNSGPAAYSVANIEPWLLTVAASSVDRSFLVAITLGNNWTTMGQGMFSGKLTRFHNLVYPEVSDLDDPRACESLSLNDTWAAGNVVLCFASDDYDDNTHDTSWSVKKVGGLGLIVAKNPTKAVEPFIDNFPCVQISLDVGMQILNYIRSTRNPQVKIGPSTTRVGQSLSTTVAYFSSRGPNSVAPAILKPDIAAPGVAILAAVPPSDPKERNSYAFISGTSMATPHVSAIVALLKSLHSHWSPAAIKSAIVTTAWTSDPYGEVIFAEGRPMKSAGPFDFGGGIVNPNKALDPGLVYDMGMADYIKYFCAMGHNNSAISGITKRSITCPKRRPSILDINVPSITIPSLRYSVNLTRTVMNVGLVNSTYKAAIVPPPGIAIFVKPRILKFNHKMERISFTVTVSTNHRVTTGYCFGSLTWLDGIHSVRIPISVRTNI 773
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 48529492 48533075 + Lag0020167.1 Lac5g3083 609725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g3083 773 ProSitePatterns Serine proteases, subtilase family, serine active site. 557 567 IPR023828 -
Lac5g3083 773 FunFam Subtilisin-like protease SBT5.3 30 120 - -
Lac5g3083 773 FunFam subtilisin-like protease SBT1.5 364 502 - -
Lac5g3083 773 SUPERFAMILY Subtilisin-like 119 632 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac5g3083 773 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 30 120 IPR037045 -
Lac5g3083 773 Pfam Subtilase family 145 592 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lac5g3083 773 Gene3D - 364 502 - -
Lac5g3083 773 FunFam Subtilisin-like protease SBT1.5 645 772 - -
Lac5g3083 773 Pfam Fibronectin type-III domain 674 769 IPR041469 -
Lac5g3083 773 ProSitePatterns Serine proteases, subtilase family, histidine active site. 231 241 IPR022398 -
Lac5g3083 773 PRINTS Subtilisin serine protease family (S8) signature 556 572 IPR015500 -
Lac5g3083 773 PRINTS Subtilisin serine protease family (S8) signature 145 164 IPR015500 -
Lac5g3083 773 PRINTS Subtilisin serine protease family (S8) signature 227 240 IPR015500 -
Lac5g3083 773 CDD PA_subtilisin_like 371 495 - -
Lac5g3083 773 ProSiteProfiles Serine proteases, subtilase domain profile. 124 628 - -
Lac5g3083 773 Pfam Peptidase inhibitor I9 41 116 IPR010259 -
Lac5g3083 773 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 41 767 IPR045051 -
Lac5g3083 773 CDD Peptidases_S8_3 117 593 IPR034197 -
Lac5g3083 773 Gene3D Peptidase S8/S53 domain 148 641 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac5g3083 773 FunFam Subtilisin-like protease SBT1.5 147 373 - -
Lac5g3083 773 Gene3D - 645 772 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g2154 Lac-Chr5:40085966 Lac5g3083 Lac-Chr5:48529492 5.10E-206 dispersed
Lac5g2155 Lac-Chr5:40110721 Lac5g3083 Lac-Chr5:48529492 3.20E-219 dispersed
Lac5g3083 Lac-Chr5:48529492 Lac9g2543 Lac-Chr9:44095565 1.10E-142 dispersed
Lac8g3033 Lac-Chr8:47100829 Lac5g3083 Lac-Chr5:48529492 1.60E-07 dispersed
Lac5g3083 Lac-Chr5:48529492 Lac5g0734 Lac-Chr5:9543800 2.40E-134 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g3083 - - - 0.0