Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g0091 ATGAGTTGCTTTTCTTGTATTAGTCCTCGTACCAAAGAGGGGAGCAGGGTCGAAATTGATAATGGTGTTCGATTTATTTCCGCGAATTCTCCAAATTCCTCAGATACATGTAGGGGAAAAGAAGCTCAGGAAAACAGTGAAAGCTGTCCAAAGGGGAGCGTTGCTGCTCGTAGTTTCACGTTCCGTGAACTCGCCACAGCCACAAGAGGTTTCAAGGAAGTGAATTTGATTGGAGAGGGTGGTTTTGGACGTGTCTACAAAGGACGTTTGGAAACAGGACAGATTGTTGCAGTTAAACAGCTTAATCGTGATGGGCTTCAAGGCTTTCAGGAGTTTATTGTAGAGGTTCTCATGTTGAGCTTGTTGCACCATCCCAATCTCGTCACCTTGATTGGTTACTGTACTGATGGAGATCAAAGGCTTCTGGTTTATGAGTACATGCCTATGGGAAGCCTGGAAGATCATCTTTTTGATTTGGGTTCTGACAAAGAGCCACTGAATTGGAAAACAAGAATCAAGATTGCTGTTGCTGCTGCCCGAGGCCTTGAGTATCTCCACTGTAAAGCAGATCCCCCTGTCATATACCGTGACTTGAAATCAGCTAATATCTTGTTGGACAACGACTTTAATCCAAAGCTTTCAGATTTTGGACTAGCTAAACTGGGACCTGTTGGTGACAATACTCATGTTTCAACCAGAGTAATGGGAACATATGGCTATTGTGCTCCAGAGTACGCCATGAGTGGCAAATTGACCCTTAAATCTGATATTTACAGCTTTGGTGTGGTTCTGCTTGAGCTTATTACAGGGCGTAAGGTAATTGATACTACAAGGAGACCAGGGGAGCAGAACCTAGTTGCTTGGTCTCGTCCTTTCCTGAAGGACCGCAGAAAGTTCGTGCAATTAGTTGATCCCCTGTTGGAAGGACACTTCCCTCTTCGTTGTTTGCAACATGCAGTTGCAATTACTGCTATGTGTCTTCAAGAACAACCATCATTTCGCCCTCTCATTAGCGATATTGTTGTAGCACTCGAATATTTGGCCTCTCAGAGTCATTTACAAGAACAACGCAATGGTTGGACTCACAGTTCGTCACAGTCATCACAGTCATCACCTTCACTACAGAATAAAGCCACCGATGGCCAGGATTCAAATCCCTGA 1161 44.36 MSCFSCISPRTKEGSRVEIDNGVRFISANSPNSSDTCRGKEAQENSESCPKGSVAARSFTFRELATATRGFKEVNLIGEGGFGRVYKGRLETGQIVAVKQLNRDGLQGFQEFIVEVLMLSLLHHPNLVTLIGYCTDGDQRLLVYEYMPMGSLEDHLFDLGSDKEPLNWKTRIKIAVAAARGLEYLHCKADPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKVIDTTRRPGEQNLVAWSRPFLKDRRKFVQLVDPLLEGHFPLRCLQHAVAITAMCLQEQPSFRPLISDIVVALEYLASQSHLQEQRNGWTHSSSQSSQSSPSLQNKATDGQDSNP 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 781329 783907 + Lag0004060.1 Lac6g0091 609860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g0091 386 Gene3D Transferase(Phosphotransferase) domain 1 147 370 - -
Lac6g0091 386 SUPERFAMILY Protein kinase-like (PK-like) 52 345 IPR011009 -
Lac6g0091 386 PANTHER OS07G0668900 PROTEIN 41 368 - -
Lac6g0091 386 SMART serkin_6 71 347 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac6g0091 386 MobiDBLite consensus disorder prediction 30 50 - -
Lac6g0091 386 ProSitePatterns Protein kinases ATP-binding region signature. 77 99 IPR017441 GO:0005524(InterPro)
Lac6g0091 386 FunFam Serine/threonine-protein kinase PBS1 147 363 - -
Lac6g0091 386 Pfam Protein kinase domain 72 340 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac6g0091 386 MobiDBLite consensus disorder prediction 357 386 - -
Lac6g0091 386 ProSiteProfiles Protein kinase domain profile. 71 347 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac6g0091 386 Gene3D Phosphorylase Kinase; domain 1 40 146 - -
Lac6g0091 386 CDD STKc_IRAK 77 345 - -
Lac6g0091 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac6g0091 386 FunFam probable serine/threonine-protein kinase RLCKVII 42 146 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac6g0091 Lac-Chr6:781329 Lac7g0849 Lac-Chr7:6877120 1.70E-133 dispersed
Lac9g2437 Lac-Chr9:43377845 Lac6g0091 Lac-Chr6:781329 1.50E-41 dispersed
Lac9g2521 Lac-Chr9:43902846 Lac6g0091 Lac-Chr6:781329 9.00E-63 dispersed
Lac6g0091 Lac-Chr6:781329 Lac6g0093 Lac-Chr6:796163 2.40E-70 proximal
Lac2g0081 Lac-Chr2:571877 Lac6g0091 Lac-Chr6:781329 1.90E-161 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86239 PF00069 Pkinase 7.80E-48 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g0091 - - - 0.0