Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g0187 ATGCTCTGTCTTCAAGCCTTCCGGGATAGAACTCGACTTCTCTCTGAGTCCCTTATACGGACCGTATCCGAATCCATGGGCAATTCGTCCTGTGGCGCCTCCGAGTTAGAACTCTGTCGAAACGACTCCGCTGCGCTTAATTTCAAATTAATCGCAATCGCCTCGATTCTCACATCGGGAGTCGTCGGAATCGTCATTCCGTTGTTCGGCAGACATCGCCGGTTCCTCAAAACCGACGGCAACCTGTTCGTGGCGGCGAAGGCGTTCGCCGCCGGGGTGATTCTGGCCACCGCGTTCGTCCACATGCTCCCCGACGGATCGAACGCTCTGTCCGATCCGTGCTTGCCGGAATTCCCCTGGTCGAAATTCCCCTTCTCTGGATTCTTCGCGATGATGGCTTCGCTGCTGACGCTCCTCGTCGATTTCGTCGGAACTCAGTACTACGAGCGGAAACAGGGGCTGATTCGATCGAAAGAGGAAGCGAGTCGGGTCGGGACGGAGGTGGATTCCGGGTTGGAATCCGGCATTCTCCCGGCCGCCGATTCGAACGCGAAAGTGTTCGGCGAAGAGGACGGCGGCGCGATGCACATCGTCGGAATCCATGCGCACGCGGCGCACCACCGGCACAGTCATCCGCATGGGAAGGAGGCGTGTGACGGGCACGTGACAGTTCATGACCATGGCCATGGCCATGCCCATGGACATGGGCATTCTCATGGGCTCGACGGCGACGATGACGAAAGCGGTGTACGACATGTCGTTGTTTCCCAGATTTTGGAGCTTGGAATAGTGTCACATTCAGTGATAATTGGGCTGTCTCTAGGAGTGTCCCACAGCCCATGCACCATTAGACCCTTAATTGCAGCCCTCTCCTTCCATCAGTTCTTTGAAGGCTTTGCTTTGGGAGGCTGCATTTCTCAGGCTCAGTTCAACACCCTCTCCACCTCCCTCATGGCTGCCTTCTTCGCCATCACCACGCCCGTCGGGATCGCCATCGGTGCTGCCGTCTCCTCCACCTACAACTCCAACAGCACCGGGGCCTTGGTTGCCGAGGGCATTTTGGACTCTCTCTCCGCCGGGATTCTGGTCTATATGGCTCTCGTTGATTTGATCGCCGCCGACTTTCTTAGCAAGAGAATGAGCTGCAATTTTAGACTCCAAATTGTTTCGTATTGCACGCTCTTTCTCGGCGCGGGATTGATGTCGTCGCTCGCGCTTTGGGCTTGA 1227 56.56 MLCLQAFRDRTRLLSESLIRTVSESMGNSSCGASELELCRNDSAALNFKLIAIASILTSGVVGIVIPLFGRHRRFLKTDGNLFVAAKAFAAGVILATAFVHMLPDGSNALSDPCLPEFPWSKFPFSGFFAMMASLLTLLVDFVGTQYYERKQGLIRSKEEASRVGTEVDSGLESGILPAADSNAKVFGEEDGGAMHIVGIHAHAAHHRHSHPHGKEACDGHVTVHDHGHGHAHGHGHSHGLDGDDDESGVRHVVVSQILELGIVSHSVIIGLSLGVSHSPCTIRPLIAALSFHQFFEGFALGGCISQAQFNTLSTSLMAAFFAITTPVGIAIGAAVSSTYNSNSTGALVAEGILDSLSAGILVYMALVDLIAADFLSKRMSCNFRLQIVSYCTLFLGAGLMSSLALWA 408
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1467088 1469626 + Lag0004156.1 Lac6g0187 609956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g0187 408 NCBIfam ZIP zinc/iron transport family 31 408 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
Lac6g0187 408 MobiDBLite consensus disorder prediction 224 246 - -
Lac6g0187 408 PANTHER ZINC/IRON TRANSPORTER 43 407 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Lac6g0187 408 Pfam ZIP Zinc transporter 47 405 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g1498 Lac-Chr2:12954873 Lac6g0187 Lac-Chr6:1467088 4.90E-07 dispersed
Lac2g2115 Lac-Chr2:25903832 Lac6g0187 Lac-Chr6:1467088 3.00E-41 dispersed
Lac5g0012 Lac-Chr5:154207 Lac6g0187 Lac-Chr6:1467088 4.70E-39 dispersed
Lac5g2851 Lac-Chr5:46824929 Lac6g0187 Lac-Chr6:1467088 1.80E-16 dispersed
Lac6g0187 Lac-Chr6:1467088 Lac9g2377 Lac-Chr9:42934231 1.20E-55 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g0187 K14709 - csv:101218224 671.003