Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g0195 ATGTTGAAGCTATCCTTCTCATCCCACCGCATTTTCATCTTCATCCTCGTCCTTTTACTCTTCTCTACGCCGTTTCTTCCTTCCACTGCCGTCCCCCTCTCCGACTCGGATCAGCCGGTTCTCGCCAACGCCACCCTCCAGTCCAACAACGTGTCCAGTCCCAGGAATAAGGAGGGGAGTTTTGCTGACATCATTGATCGGGCTTTGGAGAATGAGTTCAAGGAGAATGACCAGAACGAAGCAATCGATGCAGGAAGCTTCAACAACAGCGTAGCAGAGCAGCAGGCAGTTCTGGAGACTGTGGCAAGGGTAAAGTCAAAGAAAAATGATACGAAAGAGGAAAAGTTTCAGCTTCAAAATGTTTTCAATCTGGACAATGATAATAGAGCTGAAGATACTCCTACATTGATTGATCGAAAGGACAACGTTTTTATCATATCTAACTTTAAATCTAAATATCCAGTGCTGCAACTAGACTTAAGATTGATCTCAGATTTGGTCATCGTTATTGTCTCTGCAACTTGTGGTGGCATTGCCTTTGCCTGTGCTGGACAACCAGTTATAACTGGATACCTTCTAGCAGGATCTATTATTGGACCTGGAGGATTTAACTTTGTCAGTGAAATGGTGCAGGTTGAAACGGTAGCCCAGTTTGGTGTAATTTTTCTTCTTTTTGCACTAGGGTTGGAGTTTTCAACAACTAAGCTTCGAGTTGTTCGAGCAGTTGCTGTTCTTGGTGGTCTGCTCCAAATTTTCCTATTTATGTGCCTTAGTGGGATCACAGCCTCGTCATGTGGTGGGAGTGCTTCTGAAGGAGTTTTTGTTGGAGCTTTCTTATCAATGTCCTCAACAGCAGTGGTGCTGAAGTTTTTGATGGAAAAGAACTCAACCAATGCTCTTCATGGACAAGTCACGATTGGCACCCTTATCTTGCAGGACTGTGCTGTTGGGTTACTGTTTGCTTTGCTTCCAGTACTGGGTGGGAATTCTGGTATTCTTCAAGGAGTGATATCCATGAGTAAAGTGTTGGTGACCTTGGTTACTTTTTTGGTTGTTTTGTCAATTTTATCCCGTACATGTATTCCTTGGCTTTTAAAGTTGATGATAAGTCTATCATCACAGACCAACGAACTCTATCAATTAGCCTCAGTGGCATTCTGCTTACTCGTAGCATGGTGTAGTGATAAGTTAGGGCTAAGTTTAGAATTGGGTTCCTTTGCTGCTGGAGTGATGATATCGACAACTGATCTTGCTCAACATACACTCGAACAAATAGAGCCTATACGGAACTTTTTTGCTGCGCTTTTTCTTGCCAGCATTGGAATGCTGATCCACGTTCAGTTTTTGTGGAACCATGTGGATATATTACTGGCAGCTGTTATACTGGTGATAATTGTAAAAACCATTGTAATTAGTACCGTGGTGAAGGGTTTTGGATACAACAACAGGACATCACTTCTGGTTGGAATGTCTCTGGCTCAGATAGGGGAATTTGCTTTTGTTCTTCTCAGCCGTGCTTCTAATCTTCATCTAGTTGAGGGGAAACTGTATCTGTTGCTTATTGGGACCACAGCTCTCAGTCTGGTGACAACTCCTCTTCTTTTCAAGCTGATACCTGCTGTAGTGCATTTAGGCGTACTATTGCGGTGGTTCTCCCCAGACAGTCTAGTTGAGCCTTCCGTTGCTCTACTTCAAGACTCTTCATCAGATGGTCACCAGCAAAAAAAGGTCCAAGGCTATTTGGCTGCAGGAACTGGCATGTGCTATGGAATTTACTAG 1779 43.56 MLKLSFSSHRIFIFILVLLLFSTPFLPSTAVPLSDSDQPVLANATLQSNNVSSPRNKEGSFADIIDRALENEFKENDQNEAIDAGSFNNSVAEQQAVLETVARVKSKKNDTKEEKFQLQNVFNLDNDNRAEDTPTLIDRKDNVFIISNFKSKYPVLQLDLRLISDLVIVIVSATCGGIAFACAGQPVITGYLLAGSIIGPGGFNFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAVLGGLLQIFLFMCLSGITASSCGGSASEGVFVGAFLSMSSTAVVLKFLMEKNSTNALHGQVTIGTLILQDCAVGLLFALLPVLGGNSGILQGVISMSKVLVTLVTFLVVLSILSRTCIPWLLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLAQHTLEQIEPIRNFFAALFLASIGMLIHVQFLWNHVDILLAAVILVIIVKTIVISTVVKGFGYNNRTSLLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYLLLIGTTALSLVTTPLLFKLIPAVVHLGVLLRWFSPDSLVEPSVALLQDSSSDGHQQKKVQGYLAAGTGMCYGIY 592
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1516352 1528312 + Lag0004164.1 Lac6g0195 609964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g0195 592 Gene3D - 160 543 IPR038770 -
Lac6g0195 592 Pfam Sodium/hydrogen exchanger family 170 536 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Lac6g0195 592 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 42 561 IPR045158 GO:0015386(InterPro)|GO:0071805(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac6g0195 Lac-Chr6:1516352 Lac7g1827 Lac-Chr7:25377977 2.60E-24 dispersed
Lac12g0113 Lac-Chr12:1274695 Lac6g0195 Lac-Chr6:1516352 8.20E-29 transposed
Lac5g2858 Lac-Chr5:46860039 Lac6g0195 Lac-Chr6:1516352 8.90E-187 transposed
Lac7g0255 Lac-Chr7:1996328 Lac6g0195 Lac-Chr6:1516352 3.60E-35 transposed
Lac3g1009 Lac-Chr3:8218168 Lac6g0195 Lac-Chr6:1516352 5.80E-234 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g0195 K26735 - csv:101217282 963.37