Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac6g0213 | ATGATCACCGAATCAATGTTCCTCAATCCAACGGCCCACATTTCATCCTGGGACTCCCTCGACGATTCCGCCGCCGGAATCCCCTCCTATTTCGCCGCCGACCACGTCTCGCCGCTCGACTCGCCGACGTCGGCGCTCATGGAGTTCGACTCGTCGTTCTGGGAGGATCAGGATCTGCCGGCGGCGGTCGACGCCTTCTCGTGCGACCATTTCCGGATGTACGACTTTAAAGTTCGTACGTGCGCACGTGGGAGGTCGCACGATTGGACGAAATGTCCGTACGCTCACGCCGGCGAGAAGGCTCGCCGCCGGGATCCGAGGAAGTTCAACTACTCCGGCGTCGAGTGCCCGAATTTACGCCATGGGAGTTGTAAAAAAGGGGATGCCTGTGAGTACGCTCATGGAGTTTTCGAAATTTGGCTCCACCCGGACCGGTACCGGACTCAGCCGTGCCGTGACGGAATCGGCTGCCGGCGGCGAGTCTGTTTCTTCGCCCATACTTCGGAGCAACTCCGGATTCCTGCAAAACAGAGCCTCCGGTCTCCACGGGCGGCGACTGTATCATCGCCGACGTCGATCCTAATCTCGCCGTCGTCGGACTCCCCTCCGATGTCTCCGATCAGCCCTGCAACCACCGGCGGCGAATCGTTCAGCAGATTGGCCGCATTGATGTACAATCTCCAGCTTGACGAATTAAAGCCGAATCCGTCAGTCGCCGGATTTGGTTCGAGTCTCCGGCGGAGCTCCGGCGGATTCGATCTATGGGACAGAAGTAACGAAGAAGAACCAGCAATGGAGAGAGTGGAATCGGGAAGAAACCTCCGAGCCCAAATGTACGCCAAATTAATGCGAGAGAATTCAGTGGACAGATCGCCGCCGCTGATATGGGCTGGATTTCGGAGCTAA | 906 | 58.06 | MITESMFLNPTAHISSWDSLDDSAAGIPSYFAADHVSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEKARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPRAATVSSPTSILISPSSDSPPMSPISPATTGGESFSRLAALMYNLQLDELKPNPSVAGFGSSLRRSSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLIWAGFRS | 301 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 1667496 | 1668401 | - | Lag0004182.1 | Lac6g0213 | 609982 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac6g0213 | 301 | ProSiteProfiles | Zinc finger C3H1-type profile. | 110 | 137 | IPR000571 | GO:0046872(InterPro) | |
Lac6g0213 | 301 | SMART | c3hfinal6 | 110 | 136 | IPR000571 | GO:0046872(InterPro) | |
Lac6g0213 | 301 | SMART | c3hfinal6 | 145 | 168 | IPR000571 | GO:0046872(InterPro) | |
Lac6g0213 | 301 | MobiDBLite | consensus disorder prediction | 190 | 211 | - | - | |
Lac6g0213 | 301 | Gene3D | - | 107 | 178 | - | - | |
Lac6g0213 | 301 | PANTHER | UNKEMPT FAMILY MEMBER | 55 | 220 | IPR045234 | - | |
Lac6g0213 | 301 | FunFam | Zinc finger CCCH domain-containing protein 66 | 68 | 136 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac6g0213 | Lac-Chr6:1667496 | Lac6g3056 | Lac-Chr6:48163544 | 2.70E-62 | dispersed | |
Lac2g0440 | Lac-Chr2:3241725 | Lac6g0213 | Lac-Chr6:1667496 | 4.60E-82 | wgd | |
Lac3g0988 | Lac-Chr3:8046319 | Lac6g0213 | Lac-Chr6:1667496 | 7.20E-68 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
23964 | None | None | None | None | Lac | TF |
Pathway information
