Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g0224 ATGGCTCCTTGGTGGGGAAAAGACAGCCACAAGGGAACCCCTGTTGTTGTCAAGATGGAGAATCCCAACTGGTCAATGGTCGAACTTGAAGGTCCTTCCGATGATGACTTCATCATCGGCGCCGAGTCGCCGCAGGGCCGAGCCAGAGATAAAGGGCGAGGCAAAAATGCCAAACAGCTCACTTGGGTCCTTCTTCTTAAAGCCCACAAGGCTGCCGGTTGTTTAACCTCCATTGGCTCTGCATTGGTCAACATCGGCGCCGCTGTAAAACGCCGTCTTGCTTCCGGCAAAACCGACGCCGACGCCGACGCCGACAATGACAACGCTGACGGCGGCGTGAGGGAGAACCCAACTGTCAAAACCAGGTTTTATTTGTTTATTAAGATTTTCCTTTGGCTGTCGGTGCTTCTGTTAGGGTTTGAGGTGGCGGCATATTACAAGGGCTGGCATTTTGGGGCACCCCATTTTCAATTGGACTACTTGTGGACAGCCCCATTTGGGGTTAAGGATGTTTTCGACTGGTTTTATTTGAAATGGGTTGTGATTCGTGTTGAATATTTTGCTCCTCCTCTCCAGTTTTTGGCCAATGTTTGTATAGTGTTGTTCCTTATCCAGACTTTGGATAGGCTGATTCTTTGTTTGGGTTGTTTCTGGATCCGATTCAAGAAAATCAAACCTGTTCCTAATGTTGGTCCCTTGGATCTTGAATCTGGAGAGACTGGCTACTTCCCCATGGTTCTTGTTCAGATCCCAATGTGCAATGAGAAAGAGGTTTATCAGCAATCAATTGCTGCTGTCTGCAACTTGGATTGGCCAAAAGATAAGTTACTAATTCAGGTTCTTGATGACTCGGACGATCCAATCACCCAATTGCTGATCAAAGAGGAGGTTCATAAATGGCAGCTACTCGATGCCAACATTGAGTATCGGCATCGGGTGATCCGAGAGGGCTATAAGGCAGGCAATCTCAAGTCTGCCATGAATTGCAGCTACGTCAAAGACTATGAATTTGTTGCCATCTTTGATGCTGACTTTCAGCCTGGCTCAGATTTCCTTAAAAGAACAGTTCCTCATTTTAAGGATAATGAGGAACTAGGACTAGTTCAAGCGCGGTGGTCGTTCGTGAACAAGGACGAAAACTTATTAACCAGGCTGCAGAACATTAACTTAGCCTTCCATTTCGAAGTGGAGCAACAAGTGAATGGAGTGTTTCTCAATTTCTTTGGATTCAATGGAACGGCTGGTGTTTGGAGGATAAAGGCTCTTGAAGAAGCCGGTGGCTGGTTGGAAAGAACCACTGTTGAGGATATGGACATTGCCGTTCGTGCTCATCTTCATGGTTGGAAATTCATATTCCTCAATGATGTAGAGTGTCAATGTGAATTACCGGAGTCGTATGAAGCTTATAGAAAACAACAGCACAGATGGCATTCTGGACCGATGCAATTGTTTCGTCTTTGTTTGCCTGACATAGTTCGATCAAAGATTGGCATAGCGAAGAAATTCAATTTGATCTTCCTGTTCTTTCTCCTACGAAAGCTGATATTACCATTCTATTCGTTTACCCTTTTCTGCATAATTCTCCCAATGACGATGTTCGTTCCCGAAGCCGAGTTACCAGCATGGGTTGTATGTTACATTCCAGCTACCATGTCTTTTCTCAACATTCTACCAGCACCAAAGTTCTTCCCCTTCATTGTCCCTTACCTCCTCTTTGAGAACACAATGTCAGTAACCAAGTTCAATGCAATGGTCTCGGGACTCTTCCAGTTGGGCAGCGCATACGAATGGGTCGTTACGAAGAAATCAGGCCGCTCCTCCGAAGGTGATCTCGTCTCAATGGTTGGGAAAAAAGAGTTGAAAACTCAAAAGAGTATCTCAGCAAACAACCTTGAGGAGATTGAGTTAATCCAAAAACAGGACAAGAAGTTGCCAAGGAAGAAGCATAACAGGATATACATGAAGGAACTAGCACTGGCTTTCCTTCTTCTAACAGCCTCAGCGAGAAGCCTCCTCTCAGCTCAAGGAATTCATTTCTACTTCTTGATGTTTCAGGGAATATCCTTCCTCCTCGTCGGTCTAGACTTGATCGGTGAACAGGTTGCTTGA 2109 45.52 MAPWWGKDSHKGTPVVVKMENPNWSMVELEGPSDDDFIIGAESPQGRARDKGRGKNAKQLTWVLLLKAHKAAGCLTSIGSALVNIGAAVKRRLASGKTDADADADNDNADGGVRENPTVKTRFYLFIKIFLWLSVLLLGFEVAAYYKGWHFGAPHFQLDYLWTAPFGVKDVFDWFYLKWVVIRVEYFAPPLQFLANVCIVLFLIQTLDRLILCLGCFWIRFKKIKPVPNVGPLDLESGETGYFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKDKLLIQVLDDSDDPITQLLIKEEVHKWQLLDANIEYRHRVIREGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPGSDFLKRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQNINLAFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEEAGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIVRSKIGIAKKFNLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPATMSFLNILPAPKFFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSAYEWVVTKKSGRSSEGDLVSMVGKKELKTQKSISANNLEEIELIQKQDKKLPRKKHNRIYMKELALAFLLLTASARSLLSAQGIHFYFLMFQGISFLLVGLDLIGEQVA 702
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1786030 1788603 + Lag0004193.1 Lac6g0224 609993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g0224 702 FunFam probable xyloglucan glycosyltransferase 5 237 462 - -
Lac6g0224 702 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 173 701 - GO:0005794(PANTHER)|GO:0016757(PANTHER)
Lac6g0224 702 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 237 461 IPR029044 -
Lac6g0224 702 Pfam Glycosyl transferase family group 2 338 544 IPR001173 -
Lac6g0224 702 SUPERFAMILY Nucleotide-diphospho-sugar transferases 246 525 IPR029044 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac4g1933 Lac-Chr4:38781815 Lac6g0224 Lac-Chr6:1786030 9.20E-242 dispersed
Lac6g0224 Lac-Chr6:1786030 Lac8g2613 Lac-Chr8:43718309 3.20E-239 dispersed
Lac2g0428 Lac-Chr2:3122723 Lac6g0224 Lac-Chr6:1786030 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g0224 - - - 0.0