Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g0258 ATGAAGAAGATGAAGTTGCAAACTTGCAGACTTTCACAATGGTTTCTTCTGTTTTTGATTTCATTCTGTTTCTGCTCATTTGCTGTAGCACTAAAGAAGAATCAGCAGTTGAAGAAGAAGACTTACATAGTTCACATGGACAGAACCAACATGCCACTGGCCTTTGATGATCATTTCCAGTGGTATGATTCTTCTTTGAAGTCAGTTTCTGATTCAGCCCAAATGCTTTATTCCTACAATACAGTGGTTCATGGCTTCTCCACAAGATTGACTGTGGAGGAGGCTAAGTTGATTGAAAAGCAACTAGGAATTCTTGCTGTCGTACCTGAGGAGAAGTACGAGCTCCATACCACTCGGACGCCTGAGTTTCTTGGACTCGGGAAGAGCGTCTCTTTCTTCCCGGCGTCGGAGAAGGTTGGCGAGGTGATCATCGGGGTTCTTGACACTGGTGTGTGGCCTGAATTGGAGAGCTTCAATGATGCAGGGCTTGGACCAGTGCCTGCAAGCTGGAAAGGGGAGTGTGAAGTGGGTAAAAACTTCACCTCATCCAGTTGCAACAGGAAATTGATCGGAGCTAGATACTTTTCAAAGGGCTATGAGGCGGCATTTGGCCCAATTGACGAATCCCAGGAGTCGAAATCGCCAAGGGATGATGACGGTCATGGAACTCACACTTCGACAACTGCCGCTGGATCTGCTGTGACCGGAGCCAGCCTCTTTGGCTATGCTGCAGGGACTGCAAGAGGAATGGCGGCTGAAGCTCGGGTTGCAACATACAAGGTATGTTGGCTTGGAGGGTGTTTCGGCTCTGACATTTTAGCTGCAATGGACAAGGCTGTTGAAGATGGTGTCAATGTTCTATCCTTGTCGCTTGGTGGATCATCCCCTGATTACTACAGAGACAATGTTGCCATTGGAGCCTTCTCTGCTGCGGCTCAGGGAGTTTTTGTGTCATGTTCAGCTGGGAATGGCGGCCCATCATCAGGTAGCTTGTCCAATGTTGCGCCGTGGATAACCACTGTCGGCGCCGGGACTCTGGACAGAGACTTTCCGGCATATGTTACTCTTGGAAATGGGAAGAAGTACACAGGGGAGTCGCTCTATAGTGGAAAGCCCTTGCCGGACTCTTTAATACCAATTGTATATGCAGGCAATGCGAGTAATTCAACCAGTGGCACCCTTTGCTTGACCAGTACTCTCATTCCGGCGAAGGTGGCCGGGAAAATAGTCGTATGTGACAGAGGAGGGAACTCTCGAGTCCAGAAAGGGGTGGTGGTGAAAGAGGCCGGTGGCGCAGGAATGATTCTGGCCAACACTGAAACATACGGGGAGGAACAATTAGCCGATGCACATCTCTTGCCGGCGGCGGCGGTTGGCCAGAAAGCCGGCGACGCAATAAAGAGCTACGTCTCCTCGGACGCGAATCCGACAGCAACAATCAGCACCGGCACCACAAGATTGGGAGTTCAGCCATCGCCGGTGGTGGCCGCATTCAGTTCTCGAGGCCCTAATTTTCTCACTCCACAGATTCTCAAACCCGATCTGATAGCCCCGGGAGTGAACATTCTAGCCGGATGGACCGGCGGCGCCGGCCCGACTGGTTCAGAAGACGATAAGCGGCGCGTGCCCTTCAACATCATCTCCGGCACATCAATGTCGTGCCCTCACATCAGTGGATTAGCCGCTCTTCTGAAAGCCGCCCATCCAGATTGGAGCCCAGCCGCCATTAGATCTGCCCTAATGACCACATCGTACTCAACATACAAAAGTGGCGAAGCAATTCAAGACATATCCAATGGATTACCGTCCACGCCGTTCGATATCGGAGCCGGACATGTGAATCCAACGGCCGCCCTCGATCCCGGCCTCGTTTACGATACCACCACCGACGACTACTTCGCCTTTCTCTGCGCCCTAAACTACAGCTCACTTCAAATCAAAGTAATCGCCAAGAAAGACTTCACCTGCAGTGCGAACAAGAACTACAGATTGGAGGATCTGAACTACCCATCTTTCGCAGTTCCATTGGAGACCCCTTCAACCAGAGGAGGCGGAGACGCCGCACCGACCACCATAAAATATACAAGGACTCTAACCAACAAGGGCGCCTCATCGACGTATAAGGCGACAGTGACGTCGAAAAGTCCGTCGGTGAAGATTGTGGTTGAGCCGGAATCTCTGAGGTTTGCAGAGGCAAATGAGCAGAAGAGTTACACAGTGACTTTCATTGCTTCTCCAATGCCGTCGGGGACGGAGAGCTTTGCTCGTCTGGAATGGTCGGATGGAAAACACGTTGTGGGTAGCCCCATTGCCTTCACCTGGACTTAG 2328 51.33 MKKMKLQTCRLSQWFLLFLISFCFCSFAVALKKNQQLKKKTYIVHMDRTNMPLAFDDHFQWYDSSLKSVSDSAQMLYSYNTVVHGFSTRLTVEEAKLIEKQLGILAVVPEEKYELHTTRTPEFLGLGKSVSFFPASEKVGEVIIGVLDTGVWPELESFNDAGLGPVPASWKGECEVGKNFTSSSCNRKLIGARYFSKGYEAAFGPIDESQESKSPRDDDGHGTHTSTTAAGSAVTGASLFGYAAGTARGMAAEARVATYKVCWLGGCFGSDILAAMDKAVEDGVNVLSLSLGGSSPDYYRDNVAIGAFSAAAQGVFVSCSAGNGGPSSGSLSNVAPWITTVGAGTLDRDFPAYVTLGNGKKYTGESLYSGKPLPDSLIPIVYAGNASNSTSGTLCLTSTLIPAKVAGKIVVCDRGGNSRVQKGVVVKEAGGAGMILANTETYGEEQLADAHLLPAAAVGQKAGDAIKSYVSSDANPTATISTGTTRLGVQPSPVVAAFSSRGPNFLTPQILKPDLIAPGVNILAGWTGGAGPTGSEDDKRRVPFNIISGTSMSCPHISGLAALLKAAHPDWSPAAIRSALMTTSYSTYKSGEAIQDISNGLPSTPFDIGAGHVNPTAALDPGLVYDTTTDDYFAFLCALNYSSLQIKVIAKKDFTCSANKNYRLEDLNYPSFAVPLETPSTRGGGDAAPTTIKYTRTLTNKGASSTYKATVTSKSPSVKIVVEPESLRFAEANEQKSYTVTFIASPMPSGTESFARLEWSDGKHVVGSPIAFTWT 775
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2099405 2101732 + Lag0004227.1 Lac6g0258 610027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g0258 775 CDD Peptidases_S8_3 113 585 IPR034197 -
Lac6g0258 775 Pfam PA domain 392 466 IPR003137 -
Lac6g0258 775 ProSiteProfiles Serine proteases, subtilase domain profile. 112 619 - -
Lac6g0258 775 Pfam Subtilase family 141 587 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lac6g0258 775 Gene3D - 636 774 - -
Lac6g0258 775 ProSitePatterns Serine proteases, subtilase family, serine active site. 549 559 IPR023828 -
Lac6g0258 775 FunFam Subtilisin-like protease SBT1.5 141 358 - -
Lac6g0258 775 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 25 116 IPR037045 -
Lac6g0258 775 Pfam Peptidase inhibitor I9 41 116 IPR010259 -
Lac6g0258 775 MobiDBLite consensus disorder prediction 206 228 - -
Lac6g0258 775 FunFam subtilisin-like protease SBT1.5 347 487 - -
Lac6g0258 775 Gene3D Peptidase S8/S53 domain 142 632 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac6g0258 775 FunFam Subtilisin-like protease SBT1.9 30 116 - -
Lac6g0258 775 SUPERFAMILY PA domain 400 472 IPR046450 -
Lac6g0258 775 CDD PA_subtilisin_like 353 480 - -
Lac6g0258 775 Gene3D - 347 487 - -
Lac6g0258 775 PRINTS Subtilisin serine protease family (S8) signature 548 564 IPR015500 -
Lac6g0258 775 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Lac6g0258 775 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Lac6g0258 775 Pfam Fibronectin type-III domain 666 771 IPR041469 -
Lac6g0258 775 SUPERFAMILY Subtilisin-like 115 623 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac6g0258 775 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 41 770 IPR045051 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g1090 Lac-Chr3:8997369 Lac6g0258 Lac-Chr6:2099405 2.50E-219 dispersed
Lac4g3028 Lac-Chr4:48453912 Lac6g0258 Lac-Chr6:2099405 2.20E-212 dispersed
Lac5g0732 Lac-Chr5:9514990 Lac6g0258 Lac-Chr6:2099405 6.10E-159 dispersed
Lac5g0734 Lac-Chr5:9543800 Lac6g0258 Lac-Chr6:2099405 1.20E-159 dispersed
Lac6g0258 Lac-Chr6:2099405 Lac9g1818 Lac-Chr9:37984925 3.70E-204 dispersed
Lac2g0129 Lac-Chr2:989593 Lac6g0258 Lac-Chr6:2099405 6.40E-111 transposed
Lac5g2867 Lac-Chr5:46909412 Lac6g0258 Lac-Chr6:2099405 1.20E-92 transposed
Lac1g2631 Lac-Chr1:47657902 Lac6g0258 Lac-Chr6:2099405 6.90E-304 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g0258 - - - 0.0