Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac6g0319 | ATGGCGGTTTCACTTTCAGCAGCCACTGCCACTGCCACTGCCAGAGCCTTCCTTCCGCAGCCCTCTTCTTCATCTTCCTCCTCCATTTCCGCGCCCTTTTACACTCCCTCATTCAACCCTAAACCCTCCCGCCGCTCAATAACAGCTCAAGCCCAATCTCAGCCTCGCCAAACATGGCTCCCCGGCCTCGACCCTCCCCTGCATCTCGACGGAAGCCTCGCCGGCGATTTTGGATTCGACCCACTTGGCCTCGCCGAAGACCCAGATAGTTTGAAGTGGTACGTTCAAGCAGAGCTCGTTCATTCTCGCTTCGCCATGCTCGGCGTCTCTGGAATTCTTCTCACAGATTTGCTTCGAGTGACAGGAATCAGTAACTTGCCAGTTTGGTACAATGCGGGTGCTGTGGAATATGGCTTTGCCAACAAAGAAACCCTCTTCATTGTTCAGCTGCTGTTGATGGGCTTTGTGGAAACCAAAAGATATATGGATTTCAAGAGCCCTGGATCTCAAGCACAAGAAGGAACTTTCTTTGGATTAGAATCCGCTCTCAGGGGTCTCGAACCCGGATATCCTGGGGGTCCTCTGCTGAATCCTCTTGGCCTGGCTAAAGATATCAAGATTGCACATGACTGGAAGCTCAAGGAGATTAAGAATGGACGGCTGGCGATGGTAGCCATGCTTGGGATCTTTGTGCAAGCTTATGTTACTCATACAGGGCCAATAGATAACCTTGTGGAGCACCTTTCTAATCCATGGCACAAGACTATTATCCAGACCCTCTCGAGCTCAAGTCCTTGA | 798 | 51.25 | MAVSLSAATATATARAFLPQPSSSSSSSISAPFYTPSFNPKPSRRSITAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLAEDPDSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISNLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLLNPLGLAKDIKIAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP | 265 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 2619212 | 2620569 | + | Lag0004288.1 | Lac6g0319 | 610088 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac6g0319 | 265 | FunFam | Chlorophyll a-b binding protein, chloroplastic | 57 | 264 | - | - | |
Lac6g0319 | 265 | SUPERFAMILY | Chlorophyll a-b binding protein | 53 | 262 | - | - | |
Lac6g0319 | 265 | Gene3D | Chlorophyll a/b binding protein domain | 56 | 264 | - | - | |
Lac6g0319 | 265 | MobiDBLite | consensus disorder prediction | 18 | 60 | - | - | |
Lac6g0319 | 265 | Pfam | Chlorophyll A-B binding protein | 66 | 233 | IPR022796 | - | |
Lac6g0319 | 265 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 7 | 256 | IPR001344 | GO:0009416(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro) | |
Lac6g0319 | 265 | MobiDBLite | consensus disorder prediction | 18 | 59 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac3g0610 | Lac-Chr3:4737376 | Lac6g0319 | Lac-Chr6:2619212 | 1.40E-56 | dispersed | |
Lac3g1509 | Lac-Chr3:13926876 | Lac6g0319 | Lac-Chr6:2619212 | 1.80E-44 | dispersed | |
Lac5g1661 | Lac-Chr5:33724674 | Lac6g0319 | Lac-Chr6:2619212 | 1.60E-26 | dispersed | |
Lac6g0319 | Lac-Chr6:2619212 | Lac8g1690 | Lac-Chr8:34998592 | 3.10E-33 | dispersed | |
Lac6g0319 | Lac-Chr6:2619212 | Lac10g0087 | Lac-Chr10:677428 | 4.00E-57 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac6g0319 | K08911 | - | csv:101219846 | 399.438 |