Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g0369 ATGTCGGCAACCACCATTACAATCCCTTGTCTTCAACCCCAGTTGCGATTTCCGTCGCAGAAAACGCCGGCGAGGCCTCGTTCAAAAGTTGGGTTTGTTTCCCTACGCCCGATCTACGCCGCCGACCAGTCCTCGTCGTCCGTTAAAGCGCCGCAGCGGACGGTTTCGCCGCCGGAACCGGCGACAAAGCTTCCGTTGAGGAAGATTCCCGGCGACTATGGCCCGCCGGTGTTCGGGCCGTTGAAGGACCGACACGACTACTTTTACAATCAGGGGAGAGAGGAGTATTTGAAATCTCGAATGCTTCGATACGAATCGACTGTTTACAGAACCAACATGCCACCGGGTCCGTTTATTTCTTCGGATTCTCGAGTTGTCGTTTTGCTCGACGGCAAGAGTTTCCCTGTTCTCTTCGATAATTCTAAAGTTGAGAAGAAGGATCTCTTCACCGGAACTTACATGCCTTTAACAGAACTCACTGGCGGCTACCGGGTTCTGTCTTATATTGACCCATCGGAGCCCAATCACGAGAAGCTCAAGCAACTGATCTTCTTCCTCCTCAAGCAAAGCCGGGATAAAATTATGCCGGAATTTCACTCTACTTTTTCGGAGCTGTTCGAGACTCTGGAGAAGGAGTTGGCCACCGTCGGTAGAGCAGGGTACAATGCTCCCGGTGAACAGGCGGCGTTTAATTTCTTGGCTCGGTCTCTCTTCGGCGCCAATCCGGCTGATACCAAATTGGGCCAAGATGCTCCGAAATTGATTGGGAAATGGGTTCTGTTTCAGCTTGGCCCTGTTCTCAGTCTTGGACTCCCCAAGATCGTCGAGGAGCTCCTCCTCCGGACGGTGCGGCTACCGCCGGCGCTGATTAAAGCCGATTACCAGCGGCTATACGACTTCTTTTACCAGTCGTCGGAGGCGGTGTTTGCGGAGGCGGATAGATTGGGGATTTCGAGGGAAGAAGCTTGCCACAACTTGCTCTTCACCACTTGCTTCAATTCGTTTGGAGGAATGAAAATCTTCTTCCCCAATATGATCAAATGGATCGGCCGTGCCGGAGCGAATCTCCACACCCAACTCGCACGGGAGATTCGAACCGCCGTTAAAGCCCACGGCGGGAAGATCACGATGGGCGCTATGGAACAGATGCCTCTGATGAAATCGGTGGTGTACGAAGCGTTCAGAATCGAGCCGCCGGTTCCGGTTCAGTACGGTCGGGCGAGGAAGGATCTTGTGATCGAAAGCCACGACGCGGCTTTCGAGATCAAAGAAGGGGAAATGATTTGTGGGTACCAGCCATTCGCGACCAGAGATCCGAAAATCTTCGACAGAGCGGACGAATTCGTGCCGGATCGGTTCACCGGCGACGGCGAGGAGTTGCTGCAGCACGTCTTGTGGTCAAACGGACCGGAGAACCAGTCGCCGTCGGTTCAGAACAAGCAGTGCGCCGGAAAAGACTTCATCGTCTTCATCTCTCGCCTTCTGGTGGTGGAACTCTTCCTCCGGTACGACTCCTTCGACATCGAAGTCGGAAACTCGCCGTTGGGCGCCGCCGTGACTGTAACTTCCCTAAAGAAAGCAAGCTTTTGA 1590 53.77 MSATTITIPCLQPQLRFPSQKTPARPRSKVGFVSLRPIYAADQSSSSVKAPQRTVSPPEPATKLPLRKIPGDYGPPVFGPLKDRHDYFYNQGREEYLKSRMLRYESTVYRTNMPPGPFISSDSRVVVLLDGKSFPVLFDNSKVEKKDLFTGTYMPLTELTGGYRVLSYIDPSEPNHEKLKQLIFFLLKQSRDKIMPEFHSTFSELFETLEKELATVGRAGYNAPGEQAAFNFLARSLFGANPADTKLGQDAPKLIGKWVLFQLGPVLSLGLPKIVEELLLRTVRLPPALIKADYQRLYDFFYQSSEAVFAEADRLGISREEACHNLLFTTCFNSFGGMKIFFPNMIKWIGRAGANLHTQLAREIRTAVKAHGGKITMGAMEQMPLMKSVVYEAFRIEPPVPVQYGRARKDLVIESHDAAFEIKEGEMICGYQPFATRDPKIFDRADEFVPDRFTGDGEELLQHVLWSNGPENQSPSVQNKQCAGKDFIVFISRLLVVELFLRYDSFDIEVGNSPLGAAVTVTSLKKASF 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3068217 3069806 - Lag0004338.1 Lac6g0369 610138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g0369 529 Pfam Cytochrome P450 358 456 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac6g0369 529 SUPERFAMILY Cytochrome P450 64 506 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac6g0369 529 PANTHER CYTOCHROME P450 26 68 503 - GO:0009535(PANTHER)|GO:0009695(PANTHER)|GO:0009941(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
Lac6g0369 529 MobiDBLite consensus disorder prediction 43 64 - -
Lac6g0369 529 FunFam Allene oxide synthase, chloroplastic 64 529 - -
Lac6g0369 529 CDD CYP74 98 522 - -
Lac6g0369 529 PRINTS E-class P450 group IV signature 383 399 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac6g0369 529 PRINTS E-class P450 group IV signature 482 500 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac6g0369 529 PRINTS E-class P450 group IV signature 436 454 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac6g0369 529 Gene3D Cytochrome P450 60 529 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac12g0566 Lac-Chr12:6000830 Lac6g0369 Lac-Chr6:3068217 2.70E-102 dispersed
Lac4g1577 Lac-Chr4:34406943 Lac6g0369 Lac-Chr6:3068217 1.40E-145 dispersed
Lac4g1576 Lac-Chr4:34389624 Lac6g0369 Lac-Chr6:3068217 5.10E-143 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g0369 K01723 - csv:101221732 944.88