Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac6g0369 | ATGTCGGCAACCACCATTACAATCCCTTGTCTTCAACCCCAGTTGCGATTTCCGTCGCAGAAAACGCCGGCGAGGCCTCGTTCAAAAGTTGGGTTTGTTTCCCTACGCCCGATCTACGCCGCCGACCAGTCCTCGTCGTCCGTTAAAGCGCCGCAGCGGACGGTTTCGCCGCCGGAACCGGCGACAAAGCTTCCGTTGAGGAAGATTCCCGGCGACTATGGCCCGCCGGTGTTCGGGCCGTTGAAGGACCGACACGACTACTTTTACAATCAGGGGAGAGAGGAGTATTTGAAATCTCGAATGCTTCGATACGAATCGACTGTTTACAGAACCAACATGCCACCGGGTCCGTTTATTTCTTCGGATTCTCGAGTTGTCGTTTTGCTCGACGGCAAGAGTTTCCCTGTTCTCTTCGATAATTCTAAAGTTGAGAAGAAGGATCTCTTCACCGGAACTTACATGCCTTTAACAGAACTCACTGGCGGCTACCGGGTTCTGTCTTATATTGACCCATCGGAGCCCAATCACGAGAAGCTCAAGCAACTGATCTTCTTCCTCCTCAAGCAAAGCCGGGATAAAATTATGCCGGAATTTCACTCTACTTTTTCGGAGCTGTTCGAGACTCTGGAGAAGGAGTTGGCCACCGTCGGTAGAGCAGGGTACAATGCTCCCGGTGAACAGGCGGCGTTTAATTTCTTGGCTCGGTCTCTCTTCGGCGCCAATCCGGCTGATACCAAATTGGGCCAAGATGCTCCGAAATTGATTGGGAAATGGGTTCTGTTTCAGCTTGGCCCTGTTCTCAGTCTTGGACTCCCCAAGATCGTCGAGGAGCTCCTCCTCCGGACGGTGCGGCTACCGCCGGCGCTGATTAAAGCCGATTACCAGCGGCTATACGACTTCTTTTACCAGTCGTCGGAGGCGGTGTTTGCGGAGGCGGATAGATTGGGGATTTCGAGGGAAGAAGCTTGCCACAACTTGCTCTTCACCACTTGCTTCAATTCGTTTGGAGGAATGAAAATCTTCTTCCCCAATATGATCAAATGGATCGGCCGTGCCGGAGCGAATCTCCACACCCAACTCGCACGGGAGATTCGAACCGCCGTTAAAGCCCACGGCGGGAAGATCACGATGGGCGCTATGGAACAGATGCCTCTGATGAAATCGGTGGTGTACGAAGCGTTCAGAATCGAGCCGCCGGTTCCGGTTCAGTACGGTCGGGCGAGGAAGGATCTTGTGATCGAAAGCCACGACGCGGCTTTCGAGATCAAAGAAGGGGAAATGATTTGTGGGTACCAGCCATTCGCGACCAGAGATCCGAAAATCTTCGACAGAGCGGACGAATTCGTGCCGGATCGGTTCACCGGCGACGGCGAGGAGTTGCTGCAGCACGTCTTGTGGTCAAACGGACCGGAGAACCAGTCGCCGTCGGTTCAGAACAAGCAGTGCGCCGGAAAAGACTTCATCGTCTTCATCTCTCGCCTTCTGGTGGTGGAACTCTTCCTCCGGTACGACTCCTTCGACATCGAAGTCGGAAACTCGCCGTTGGGCGCCGCCGTGACTGTAACTTCCCTAAAGAAAGCAAGCTTTTGA | 1590 | 53.77 | MSATTITIPCLQPQLRFPSQKTPARPRSKVGFVSLRPIYAADQSSSSVKAPQRTVSPPEPATKLPLRKIPGDYGPPVFGPLKDRHDYFYNQGREEYLKSRMLRYESTVYRTNMPPGPFISSDSRVVVLLDGKSFPVLFDNSKVEKKDLFTGTYMPLTELTGGYRVLSYIDPSEPNHEKLKQLIFFLLKQSRDKIMPEFHSTFSELFETLEKELATVGRAGYNAPGEQAAFNFLARSLFGANPADTKLGQDAPKLIGKWVLFQLGPVLSLGLPKIVEELLLRTVRLPPALIKADYQRLYDFFYQSSEAVFAEADRLGISREEACHNLLFTTCFNSFGGMKIFFPNMIKWIGRAGANLHTQLAREIRTAVKAHGGKITMGAMEQMPLMKSVVYEAFRIEPPVPVQYGRARKDLVIESHDAAFEIKEGEMICGYQPFATRDPKIFDRADEFVPDRFTGDGEELLQHVLWSNGPENQSPSVQNKQCAGKDFIVFISRLLVVELFLRYDSFDIEVGNSPLGAAVTVTSLKKASF | 529 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 3068217 | 3069806 | - | Lag0004338.1 | Lac6g0369 | 610138 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac6g0369 | 529 | Pfam | Cytochrome P450 | 358 | 456 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac6g0369 | 529 | SUPERFAMILY | Cytochrome P450 | 64 | 506 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac6g0369 | 529 | PANTHER | CYTOCHROME P450 26 | 68 | 503 | - | GO:0009535(PANTHER)|GO:0009695(PANTHER)|GO:0009941(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
Lac6g0369 | 529 | MobiDBLite | consensus disorder prediction | 43 | 64 | - | - | |
Lac6g0369 | 529 | FunFam | Allene oxide synthase, chloroplastic | 64 | 529 | - | - | |
Lac6g0369 | 529 | CDD | CYP74 | 98 | 522 | - | - | |
Lac6g0369 | 529 | PRINTS | E-class P450 group IV signature | 383 | 399 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac6g0369 | 529 | PRINTS | E-class P450 group IV signature | 482 | 500 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac6g0369 | 529 | PRINTS | E-class P450 group IV signature | 436 | 454 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac6g0369 | 529 | Gene3D | Cytochrome P450 | 60 | 529 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac12g0566 | Lac-Chr12:6000830 | Lac6g0369 | Lac-Chr6:3068217 | 2.70E-102 | dispersed | |
Lac4g1577 | Lac-Chr4:34406943 | Lac6g0369 | Lac-Chr6:3068217 | 1.40E-145 | dispersed | |
Lac4g1576 | Lac-Chr4:34389624 | Lac6g0369 | Lac-Chr6:3068217 | 5.10E-143 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac6g0369 | K01723 | - | csv:101221732 | 944.88 |