Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac6g0435 | ATGTTCGTGCCCTTGCTCTGCTTTCTCTGCTTCGCGGCCGCCGCGGCCGGCGTCGCTGCCCTCTCCGTCGTCGTTTTCCGATTGCGACGATCGAGTTCCGATTCTTCTTCTTCTCCTCCTCCTGGAAGCAGAGGATTGCCTCTGATCGGAGAGACGATCCAGTTCATGGCCGCCGTCAATAGTAGCAATGGCGTTTATGATTTCGTTAGAATCCGCTGCCTCCGTTATGGAAGATGTTTTAAGACTCGTATATTCGGGGAAACGCACGTGTTCGTTTCGAGCACCGAATCGGCGAAGCTGATACTCAACGACGGCGGAGGTAGCTTCACGAAAAAGTACATAAGGTCGATCGCCGAGCTCGTCGGGCACCGGAGTTTGCTGTGTGCGTCACATGTGCAGCACAAATTCTTACGCAGCCGTCTCATCAATCTGTTCTCCGCCAGTTTCTTGGCCTCCTTCGTCACGCAGTTCGATCAACAGATCATTGAGGCGTTGAGGCGCTGGGAAAGCGGATCCACCATTCTTCTTCTCAACGAAGCCCTCAAGATAACTTGCAAAGCAATGTGCAAGATGTTGATGAGCTTAGAGAACGAGAACGAATTAGAGCTATTGCAGAAGGAGTTAGCTCATGTGTGCGAAGCAATGCTCGCATTTCCATGGCGGTTTCCAGGGACAAGATTCTACAATGGCCTCAAGGCAAGAAGAAGAATCATAAAGATACTCGAAAAGGCGATTCGAGAGAGACGGGGATCGGAGGCTCGGTGCGGGGATTTCCTGCAACGGCTTTTGACGGAGGAGGAGGAGGATGGCGATGGCAGAGGAGTGCTTTCGGATGCAGAGATCGGAGATAATATATTGACGATGTTGATCGCCGGGCAGGATACGACGGCAAGTGCCATCACTTGGATGGTGAAGTTCTTGGATGAGAATCCTAGTGTGCTTCAAAATCTAAAGGATGAACAATTTGAGATATTGAGCAAACAACAAGATCATGGGAATTGTTTCCTAACGTTGGAAGATCTTGGCAACATGTCTTATGCTACTAAGGTAGTAAAAGAATCCTTGAGGTTAGCGTCTGTGGTGCCTTGGTTCCCAAGGCTAGTCCTTCAAGACTCTGAAATTCAAGGCAATTTCATATATTTTTTTTTCCCCTTAACTTTTCCATTTTCTTTATGCTTTAAATCTCAATTATGGTCCTCGAACTTAGGAGTGAAAACGGGTCAGGTTTTCATAAAATCGACCCGACCCGACATAAATCGGTTTTTAACTATGAGTAAACCGACCCGACCTGATTAG | 1296 | 48.15 | MFVPLLCFLCFAAAAAGVAALSVVVFRLRRSSSDSSSSPPPGSRGLPLIGETIQFMAAVNSSNGVYDFVRIRCLRYGRCFKTRIFGETHVFVSSTESAKLILNDGGGSFTKKYIRSIAELVGHRSLLCASHVQHKFLRSRLINLFSASFLASFVTQFDQQIIEALRRWESGSTILLLNEALKITCKAMCKMLMSLENENELELLQKELAHVCEAMLAFPWRFPGTRFYNGLKARRRIIKILEKAIRERRGSEARCGDFLQRLLTEEEEDGDGRGVLSDAEIGDNILTMLIAGQDTTASAITWMVKFLDENPSVLQNLKDEQFEILSKQQDHGNCFLTLEDLGNMSYATKVVKESLRLASVVPWFPRLVLQDSEIQGNFIYFFFPLTFPFSLCFKSQLWSSNLGVKTGQVFIKSTRPDINRFLTMSKPTRPD | 431 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 3552564 | 3557456 | - | Lag0004404.1 | Lac6g0435 | 610204 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac6g0435 | 431 | SUPERFAMILY | Cytochrome P450 | 37 | 379 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac6g0435 | 431 | PANTHER | CYTOCHROME P450 26 | 40 | 408 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER) | |
| Lac6g0435 | 431 | Gene3D | Cytochrome P450 | 29 | 384 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac6g0435 | 431 | PRINTS | E-class P450 group IV signature | 344 | 360 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac6g0435 | 431 | PRINTS | E-class P450 group IV signature | 39 | 56 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac6g0435 | 431 | PRINTS | E-class P450 group IV signature | 282 | 308 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac6g0435 | 431 | Pfam | Cytochrome P450 | 40 | 379 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac1g2608 | Lac-Chr1:47432863 | Lac6g0435 | Lac-Chr6:3552564 | 4.00E-79 | dispersed | |
| Lac6g0435 | Lac-Chr6:3552564 | Lac7g2750 | Lac-Chr7:46655566 | 1.90E-32 | dispersed | |
| Lac6g0435 | Lac-Chr6:3552564 | Lac2g1713 | Lac-Chr2:15881027 | 5.10E-54 | transposed |
Pathway information