Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g0461 ATGGCGGACACCGGCTCGGTCTCCGACAAGAGAATGTCGTGTTCGATCCCCGAGAGGTTCCAGCTCCATGCCGCCATGTTGGCCTTGCAATTCGGCTATGCCGGTTTCCATGTCGTCTCTAGAGCTGCCCTTAACATGGGCATCAGTAAACTCGTCTTCCCTGTCTATCGAAACGTCATCGCTTTGCTTCTTCTTCTTCCCTTCGCATATTTCATTGAAAAGAAGGATAGGCCTGCGCTCACTCTTAACTTCGTTCTTCAGTTCTTCCTCCTCGCTCTCGTTGGAATTACAGCCAATCAAGGGTTTTATTTGCTGGGTTTGGATAATACTTCCCCAACCTTTGCTTCTGCTATTCAGAATTCTGTCCCTGCCATTACTTTCCTCATGGCTGCACTTCTCAGGATTGAACAAGTGCGACTGAACCGGAAAGACGGAATAGCGAAGGTGGTGGGGACTCTGTGCTGCGTGGCCGGAGCGACGGTGATCACATTATACAAAGGGCCGACCATCTACAGCCCGGCGACGGCGGTGACGGTGCAGGGGAGGGCGGAGACGGCGGGGATGCTGACGGGGCCAGGAATGTTCCCGTCACTGGGCGATGCAAAGGGGAAGAGCTGGACCATGGGGTGCGTGTACTTGATCGGGCACTGCCTGTCGTGGTCGGCGTGGCTGGTTCTACAAGCGCCGGTGCTGAAGAAATACCCGGCTCGGCTCTCCGTCACGTCCTTCACTTGCTTCTTTGGCCTCGTCCAATTCTTCATCATCGCCGCCGTGTTCGAGCGCGACGCTCAGGCTTGGCTCTTCCACTCCGGCGCCGAAGCCTTCAGTATTGTTTATGCGGGGGTGGTGGCTTCGGGGATAGCATTTGCTGTACAGATATGGTGCATTGACAGAGGTGGCCCTGTCTTTGTTGCTGTCTACCAACCCGTTCAGACCTTCGTCGTTGCTGTCATGGCTTCCTTCGCTTTGGGCGAGGAGTTCTACTTGGGAGGGGGCGGTGCTGATTATATCGGGACTGTACCTTGTGCTGTGGGGCAAGAGCGAAGAAAAGAAGCTCTTGATGGAAAGGGCAGTGATCCAGTCTACTCCGGACCACGGTACCAGCAGAACAAGCGGCCACATCAAGCCGTCCCTGAATCAGCCACTCCTCCATCCTACGGCTGA 1164 55.33 MADTGSVSDKRMSCSIPERFQLHAAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNVIALLLLLPFAYFIEKKDRPALTLNFVLQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAALLRIEQVRLNRKDGIAKVVGTLCCVAGATVITLYKGPTIYSPATAVTVQGRAETAGMLTGPGMFPSLGDAKGKSWTMGCVYLIGHCLSWSAWLVLQAPVLKKYPARLSVTSFTCFFGLVQFFIIAAVFERDAQAWLFHSGAEAFSIVYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVAVMASFALGEEFYLGGGGADYIGTVPCAVGQERRKEALDGKGSDPVYSGPRYQQNKRPHQAVPESATPPSYG 387
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3765178 3769009 - Lag0004430.1 Lac6g0461 610230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g0461 387 PANTHER WAT1-RELATED PROTEIN 24 331 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Lac6g0461 387 Pfam EamA-like transporter family 27 163 IPR000620 GO:0016020(InterPro)
Lac6g0461 387 Pfam EamA-like transporter family 208 329 IPR000620 GO:0016020(InterPro)
Lac6g0461 387 MobiDBLite consensus disorder prediction 350 387 - -
Lac6g0461 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g0449 Lac-Chr3:3424358 Lac6g0461 Lac-Chr6:3765178 3.40E-99 dispersed
Lac4g0108 Lac-Chr4:1807002 Lac6g0461 Lac-Chr6:3765178 1.00E-11 dispersed
Lac6g0461 Lac-Chr6:3765178 Lac6g2424 Lac-Chr6:41984277 1.00E-53 dispersed
Lac2g0178 Lac-Chr2:1356589 Lac6g0461 Lac-Chr6:3765178 1.00E-154 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g0461 - - - 0.0