Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g0465 ATGGGGCAAGTGCACCAAAGCAAACTCTTGCAGACAATTGGCCATCAATATGAGCAGTGGAATCTTATGGTAAAGAAGGAAAAGTCTGTTTACCACACTTTGAATATGCTCAGTGTCGACGTAACAAAGAAATGTCTTGTAGGTGAAGGCTGGTGTCCTGTCTTTGCAACAAATCAGATTCAAAGTGTGATGCAGAAGGCTACCTTTGACAGCAAATCACAAATTGAGGCTATCTTTCATGTTTTACAAACGAAGGAAGCACCACCAACATATTTCCGCACAAACAAATTTACTTCTTCATTTCAAGAAATCGTGGATGCATATGGGGTTGCGAAGTATCAGGAAGCAAATCCTGGAGTCTACACGATTGTCACCTTCCCTTTCCTTTTTGCTGTAATGTTTGGTGATTGGGGTCACGGAATATGTTTGTTGCTGGCAACATTATATTTCATAATAAGGGAGAAGAAATTTTCCAGCCAGAAACTTGGAGATATCATTGAAATGACTTTTGGGGGACGTTATGTTATCATGATGATGGCACTTTTTTCAATCTACACAGGACTGATTTATAATGAATTCTTTTCTGTCCCATTTGAACTCTTTGGGCCTTCTGCATATGGTTGTCGCGATACTTCATGCAGGGATGCTACTACCATTGGTTTAATAAAGATTCGTGATACTTATCCATTTGGTGTGGATCCTAAGTGGCATGGCACTCGAAGTGAGTTACCTTTTCTCAACTCATTGAAGATGAAGATGTCCATCCTACTGGGAGTAGCTCAAATGAATCTCGGAATTATATTGAGCTACTTCAATGCAAAATTCTTTGGAGAAAACATTAACATCTGGTACCAATTTGTTCCACAGATGATATTCTTGAACAGCTTATTTGGTTACCTCTCACTTCTCATAATTGTAAAATGGTCCTCTGGATCTCAAGCTGATCTGTATCACGTAATGATATATATGTTCTTGAGTCCTACAGATGATTTAGGCGAAAATCAGCTTTTTCCAGGACAGAAGTTTCTTCAGCTTCTGTTACTTCTGTCTGCCCTCACTGCCGTGCCATGGATGTTGCTTCCCAAGCCTTTTCTGTTGAAGAAACAAAATGAAGAAAGGCACCAAGGGCAATCCTACTCCCGACTTCACAGCGTAGATGACAATCTTGAAACGAAACAGAACCACGGTTCCCACGGCCATGAGGAGTTTGAATTCAGCGAGGTCTTTGTACACCAACTTATACATACTATAGAGTTTGTACTTGGTGCAGTTTCTAACACAGCATCTTATCTACGTCTATGGGCCCTCAGTCTAGCCCATTCGGAGTTGTCAAGTGTATTTTACGACAAGGTTCTGCTCCTAGCTTGGGGGTTCAATAGTTGGATCATCCGAGGAATAGGAATAGCCGTTTTTATATGTGCAACTGTCGGAGTTTTACTAGTTATGGAAACTCTAAGCGCATTCCTGCACGCCTTGAGGCTCCATTGGGTGGAATTTCAGAACAAATTCTATGCAGGAGATGGATTCAAATTTTCTCCCTTCTCGTTTTCGTTGCTTCGAGAGGAGGATGAGTGA 1575 41.14 MGQVHQSKLLQTIGHQYEQWNLMVKKEKSVYHTLNMLSVDVTKKCLVGEGWCPVFATNQIQSVMQKATFDSKSQIEAIFHVLQTKEAPPTYFRTNKFTSSFQEIVDAYGVAKYQEANPGVYTIVTFPFLFAVMFGDWGHGICLLLATLYFIIREKKFSSQKLGDIIEMTFGGRYVIMMMALFSIYTGLIYNEFFSVPFELFGPSAYGCRDTSCRDATTIGLIKIRDTYPFGVDPKWHGTRSELPFLNSLKMKMSILLGVAQMNLGIILSYFNAKFFGENINIWYQFVPQMIFLNSLFGYLSLLIIVKWSSGSQADLYHVMIYMFLSPTDDLGENQLFPGQKFLQLLLLLSALTAVPWMLLPKPFLLKKQNEERHQGQSYSRLHSVDDNLETKQNHGSHGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGFNSWIIRGIGIAVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYAGDGFKFSPFSFSLLREEDE 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3813020 3817102 - Lag0004434.1 Lac6g0465 610234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g0465 524 PANTHER VACUOLAR PROTON ATPASES 3 522 IPR002490 GO:0007035(PANTHER)|GO:0016471(PANTHER)|GO:0033179(InterPro)|GO:0046961(InterPro)|GO:0051117(PANTHER)|GO:1902600(InterPro)
Lac6g0465 524 Pfam V-type ATPase 116kDa subunit family 4 516 IPR002490 GO:0033179(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac6g0465 Lac-Chr6:3813020 Lac9g2546 Lac-Chr9:44116756 1.50E-217 dispersed
Lac4g1440 Lac-Chr4:32843009 Lac6g0465 Lac-Chr6:3813020 2.80E-218 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g0465 K02154 - csv:101209817 955.666