Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g0590 ATGGCTGGTCTTTCAAGAGCTCTGCTTATTTTCTTCTTCTTCATCAGCTTCTCAGAAGCCCGAGAGATCTTGGTCGGAGGCAAATCCAGTGCCTGGAAAATCCCTTCTTCTCAAGCTCAGTCTCTCAATCAATGGGCTGAAACCTCTCGATTTCGCGTCGGCGACACTCTCGTGTGGGATTACGAGGAAGGGAAAGATTCGGTACTGAGAGTGACCAAGGAAGATTACGAAGCCTGCAACACGAAGAACCCAGTGGAGAATTTCGAGGACGGGAACACGAAGGTGGAGCTGGAGAAGCCAGGGCCATTCTACTTCATCAGTGGAGCCAAGGGCCACTGCGAGCAGGGCCAGAAGCTTGTCGTCGTCGTCATGACTCCTCGCCACAGGTTCATCGCCATCTCTCCGGCGCCTTCTCCGGCGGAGGTTGAGGCTCCGGCGGTCGCTCCGTCGAGTGGTGCTGTAAGTTTGAAGGTTGGGTTTGTGGCGGTGGTGGTGGGGATTTTGGGACTTGGAGTTGCTTTCGTTTGA 528 54.36 MAGLSRALLIFFFFISFSEAREILVGGKSSAWKIPSSQAQSLNQWAETSRFRVGDTLVWDYEEGKDSVLRVTKEDYEACNTKNPVENFEDGNTKVELEKPGPFYFISGAKGHCEQGQKLVVVVMTPRHRFIAISPAPSPAEVEAPAVAPSSGAVSLKVGFVAVVVGILGLGVAFV 175
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4927116 4927739 - Lag0004559.1 Lac6g0590 610359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g0590 175 Gene3D - 19 127 IPR008972 -
Lac6g0590 175 CDD OsENODL1_like 21 124 IPR041846 -
Lac6g0590 175 PANTHER BLUE COPPER PROTEIN 13 133 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Lac6g0590 175 Pfam Plastocyanin-like domain 32 117 IPR003245 GO:0009055(InterPro)
Lac6g0590 175 SUPERFAMILY Cupredoxins 20 124 IPR008972 -
Lac6g0590 175 FunFam Early nodulin-like protein 1 20 128 - -
Lac6g0590 175 ProSiteProfiles Phytocyanin domain profile. 21 125 IPR003245 GO:0009055(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g1434 Lac-Chr5:28717383 Lac6g0590 Lac-Chr6:4927116 2.60E-27 dispersed
Lac6g0590 Lac-Chr6:4927116 Lac9g2175 Lac-Chr9:41218947 3.80E-24 dispersed
Lac6g0590 Lac-Chr6:4927116 Lac2g1256 Lac-Chr2:10287733 2.40E-26 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g0590 - - - 0.0