Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac6g0673 | ATGGGGGCTCCATTCGAGGGAATAGTAAGCGATATCAAGGGGAGGGCTGCGTGCTATAAGCAGGATTGGATATGTGCACTGTGTTCAGGCGTCAGGATTTTAGCTCCCACTATGTACATCTTCTTCGCCTCTGCTCTTCCTGTTATTGCCTTCGGAGAGCAACTTAGCAGGGATACAGGTGGAAGTTTGAGCACAGTGGAAACATTAGCCTCAACTGCGGTGTGTGGAATTATCCACTCCATATTTGGGGGACAGCCTTTGCTGATTTTAGGAGTGGCAGAACCAACAGTTATAATGTACACTTACTTGTACACTTTCTGCAAAGGTCGACCCGAGTTAGGAGGCGAACTCTTTTTAGCCTGGGCTGGATGGGTGTGCATCTGGTCAGGATTTTTCCTGATTCTCCTTGGGATCTTTAATGCTTGCTCCATCATCACCAAATTTACAAGAGTTGCGGGGGAATTATTTGGCATGCTTATTGCTGTTCTTTTCTTCCAAGAGGCAATAAAGGGATTGATCAGCGAGTTCACGATTCCCAAGTCAGAAAATCCAAAGCTATTGGAGTACCAATTTCAATGGTTGTACGCAAATGGGTTGCTTGCTATCATTTTTTCCGTCGGTCTACTCTTCACTGCCCTGAAAAGCAGACACGCAAGATCGTGGAAATATGGCACCGGCTGGTTTCGGAGTTTCATTGCTGACTACGGGGTTCCGCTTATGGTTGTGTTATGGACAGCAATGTCTTATGGAGTTCCCAGCAAGGTTCCAGAAGGAGTTCCAAGGAGACTCTTTTGTCCATTACCTTGGGAGCCGGCCTCATTGTACCACTGGACCGTAGTCAAGGACATGGGGAAGGTTCCTTTGACTTACATCTTTGCTGCTTGTCTGCCAGCCGTGATGATAGCAGGCCTATACTTTTTTGACCATAGTGTTGCATCACAAATGGCACAACAAAAAGAGTTTAATCTTCAAAATCCATCTGCATATCATTATGATGTCTTCTTGCTCGGGATTATGACTTTGATTTGTGGATTGCTTGGATTGCCTCCTTCTAACGGTGTACTCCCACAGTCCCCAATGCACACCAAGAGTCTCGCAGTGCTTAAACGGCAGCTAATTCGAAGAAAAATGGTAAAGAGTGCAAGGGAATGTATCAAACGAAAAGCGAGCAACTCTGAAATTTATGGAAAGATGCAAGCTGTGTTCATTGAAATGGACGCATCTCCAACTCCTAAAGAGCTAGAAACCTTGACGAAGGCAGTAATGAACGCCGATGAAGGTGATAAGAAGGGAAAATTCGACGCTGAGAAAAATATAGATCCTTATTTGCCTGTTCGTGTGAATGAACAAAGAATGAGCAACTTGCTGCAGTCCTTCCTTGTGGCCGCATCAATATTTGCTATCCCTATAATAAAAATGATACCCACTTCAGTTCTTTGGGGATACTTTGCTTACATGGCCATTGATAGTCTCCCAGGAAATCAGTTCTGGGAAAGGATGTTGTTGCTCTTCATTACCCCCAGCCGGCGTTTCAAGGTCTTGGAGGGGTCTCATTTATCGTTCGTCGAATCGGTGCCATTCAAGACCATTGCTTCGTTTACCCTCCTTCAGTTTGCATATTTCTTGTTGTGCTTTGGTGTAACATGGATACCTGTAGCTGGGATCCTGTTCCCACTGCCATTTTTCCTCCTCATTAGCATAAGAGAGCATATACTTCCCAAGTTCTTCCAACACAACCATCTGCAAGAGCTAGATGCTTCAGAGTATGAGGAGATTGCTGGTGCTCGACGACGCGCCGTGAATCTCACAGCTCCGGAAAAGGAGCCACCAGATTCAGTTGCAGATGAGAGTAACGAAGAATACTACGATGCGGAGATATTAGACGAGATGACGACCCATAGAGGAGAATTGAAGCTTAGAACTGTAAGTTTCAACGAAGAAAGGTTCATCCTGAAGATTCCCATCGATTACAATGAAGCAGTTGGAGACGAATAG | 1995 | 45.16 | MGAPFEGIVSDIKGRAACYKQDWICALCSGVRILAPTMYIFFASALPVIAFGEQLSRDTGGSLSTVETLASTAVCGIIHSIFGGQPLLILGVAEPTVIMYTYLYTFCKGRPELGGELFLAWAGWVCIWSGFFLILLGIFNACSIITKFTRVAGELFGMLIAVLFFQEAIKGLISEFTIPKSENPKLLEYQFQWLYANGLLAIIFSVGLLFTALKSRHARSWKYGTGWFRSFIADYGVPLMVVLWTAMSYGVPSKVPEGVPRRLFCPLPWEPASLYHWTVVKDMGKVPLTYIFAACLPAVMIAGLYFFDHSVASQMAQQKEFNLQNPSAYHYDVFLLGIMTLICGLLGLPPSNGVLPQSPMHTKSLAVLKRQLIRRKMVKSARECIKRKASNSEIYGKMQAVFIEMDASPTPKELETLTKAVMNADEGDKKGKFDAEKNIDPYLPVRVNEQRMSNLLQSFLVAASIFAIPIIKMIPTSVLWGYFAYMAIDSLPGNQFWERMLLLFITPSRRFKVLEGSHLSFVESVPFKTIASFTLLQFAYFLLCFGVTWIPVAGILFPLPFFLLISIREHILPKFFQHNHLQELDASEYEEIAGARRRAVNLTAPEKEPPDSVADESNEEYYDAEILDEMTTHRGELKLRTVSFNEERFILKIPIDYNEAVGDE | 664 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 5713728 | 5717176 | - | Lag0004642.1 | Lac6g0673 | 610442 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac6g0673 | 664 | Pfam | HCO3- transporter integral membrane domain | 445 | 587 | IPR011531 | GO:0006820(InterPro)|GO:0016020(InterPro) | |
Lac6g0673 | 664 | Pfam | HCO3- transporter integral membrane domain | 195 | 371 | IPR011531 | GO:0006820(InterPro)|GO:0016020(InterPro) | |
Lac6g0673 | 664 | Pfam | HCO3- transporter integral membrane domain | 4 | 178 | IPR011531 | GO:0006820(InterPro)|GO:0016020(InterPro) | |
Lac6g0673 | 664 | PANTHER | ANION EXCHANGE PROTEIN | 3 | 634 | IPR003020 | GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER) | |
Lac6g0673 | 664 | Gene3D | Helical hairpin bin | 15 | 57 | - | - | |
Lac6g0673 | 664 | FunFam | probable boron transporter 2 | 15 | 57 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac10g0452 | Lac-Chr10:3562649 | Lac6g0673 | Lac-Chr6:5713728 | 6.70E-216 | transposed | |
Lac11g0438 | Lac-Chr11:4476716 | Lac6g0673 | Lac-Chr6:5713728 | 5.30E-221 | transposed | |
Lac11g0702 | Lac-Chr11:7207509 | Lac6g0673 | Lac-Chr6:5713728 | 2.20E-255 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac6g0673 | K24194 | - | csv:101220188 | 1210.67 |