Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g0673 ATGGGGGCTCCATTCGAGGGAATAGTAAGCGATATCAAGGGGAGGGCTGCGTGCTATAAGCAGGATTGGATATGTGCACTGTGTTCAGGCGTCAGGATTTTAGCTCCCACTATGTACATCTTCTTCGCCTCTGCTCTTCCTGTTATTGCCTTCGGAGAGCAACTTAGCAGGGATACAGGTGGAAGTTTGAGCACAGTGGAAACATTAGCCTCAACTGCGGTGTGTGGAATTATCCACTCCATATTTGGGGGACAGCCTTTGCTGATTTTAGGAGTGGCAGAACCAACAGTTATAATGTACACTTACTTGTACACTTTCTGCAAAGGTCGACCCGAGTTAGGAGGCGAACTCTTTTTAGCCTGGGCTGGATGGGTGTGCATCTGGTCAGGATTTTTCCTGATTCTCCTTGGGATCTTTAATGCTTGCTCCATCATCACCAAATTTACAAGAGTTGCGGGGGAATTATTTGGCATGCTTATTGCTGTTCTTTTCTTCCAAGAGGCAATAAAGGGATTGATCAGCGAGTTCACGATTCCCAAGTCAGAAAATCCAAAGCTATTGGAGTACCAATTTCAATGGTTGTACGCAAATGGGTTGCTTGCTATCATTTTTTCCGTCGGTCTACTCTTCACTGCCCTGAAAAGCAGACACGCAAGATCGTGGAAATATGGCACCGGCTGGTTTCGGAGTTTCATTGCTGACTACGGGGTTCCGCTTATGGTTGTGTTATGGACAGCAATGTCTTATGGAGTTCCCAGCAAGGTTCCAGAAGGAGTTCCAAGGAGACTCTTTTGTCCATTACCTTGGGAGCCGGCCTCATTGTACCACTGGACCGTAGTCAAGGACATGGGGAAGGTTCCTTTGACTTACATCTTTGCTGCTTGTCTGCCAGCCGTGATGATAGCAGGCCTATACTTTTTTGACCATAGTGTTGCATCACAAATGGCACAACAAAAAGAGTTTAATCTTCAAAATCCATCTGCATATCATTATGATGTCTTCTTGCTCGGGATTATGACTTTGATTTGTGGATTGCTTGGATTGCCTCCTTCTAACGGTGTACTCCCACAGTCCCCAATGCACACCAAGAGTCTCGCAGTGCTTAAACGGCAGCTAATTCGAAGAAAAATGGTAAAGAGTGCAAGGGAATGTATCAAACGAAAAGCGAGCAACTCTGAAATTTATGGAAAGATGCAAGCTGTGTTCATTGAAATGGACGCATCTCCAACTCCTAAAGAGCTAGAAACCTTGACGAAGGCAGTAATGAACGCCGATGAAGGTGATAAGAAGGGAAAATTCGACGCTGAGAAAAATATAGATCCTTATTTGCCTGTTCGTGTGAATGAACAAAGAATGAGCAACTTGCTGCAGTCCTTCCTTGTGGCCGCATCAATATTTGCTATCCCTATAATAAAAATGATACCCACTTCAGTTCTTTGGGGATACTTTGCTTACATGGCCATTGATAGTCTCCCAGGAAATCAGTTCTGGGAAAGGATGTTGTTGCTCTTCATTACCCCCAGCCGGCGTTTCAAGGTCTTGGAGGGGTCTCATTTATCGTTCGTCGAATCGGTGCCATTCAAGACCATTGCTTCGTTTACCCTCCTTCAGTTTGCATATTTCTTGTTGTGCTTTGGTGTAACATGGATACCTGTAGCTGGGATCCTGTTCCCACTGCCATTTTTCCTCCTCATTAGCATAAGAGAGCATATACTTCCCAAGTTCTTCCAACACAACCATCTGCAAGAGCTAGATGCTTCAGAGTATGAGGAGATTGCTGGTGCTCGACGACGCGCCGTGAATCTCACAGCTCCGGAAAAGGAGCCACCAGATTCAGTTGCAGATGAGAGTAACGAAGAATACTACGATGCGGAGATATTAGACGAGATGACGACCCATAGAGGAGAATTGAAGCTTAGAACTGTAAGTTTCAACGAAGAAAGGTTCATCCTGAAGATTCCCATCGATTACAATGAAGCAGTTGGAGACGAATAG 1995 45.16 MGAPFEGIVSDIKGRAACYKQDWICALCSGVRILAPTMYIFFASALPVIAFGEQLSRDTGGSLSTVETLASTAVCGIIHSIFGGQPLLILGVAEPTVIMYTYLYTFCKGRPELGGELFLAWAGWVCIWSGFFLILLGIFNACSIITKFTRVAGELFGMLIAVLFFQEAIKGLISEFTIPKSENPKLLEYQFQWLYANGLLAIIFSVGLLFTALKSRHARSWKYGTGWFRSFIADYGVPLMVVLWTAMSYGVPSKVPEGVPRRLFCPLPWEPASLYHWTVVKDMGKVPLTYIFAACLPAVMIAGLYFFDHSVASQMAQQKEFNLQNPSAYHYDVFLLGIMTLICGLLGLPPSNGVLPQSPMHTKSLAVLKRQLIRRKMVKSARECIKRKASNSEIYGKMQAVFIEMDASPTPKELETLTKAVMNADEGDKKGKFDAEKNIDPYLPVRVNEQRMSNLLQSFLVAASIFAIPIIKMIPTSVLWGYFAYMAIDSLPGNQFWERMLLLFITPSRRFKVLEGSHLSFVESVPFKTIASFTLLQFAYFLLCFGVTWIPVAGILFPLPFFLLISIREHILPKFFQHNHLQELDASEYEEIAGARRRAVNLTAPEKEPPDSVADESNEEYYDAEILDEMTTHRGELKLRTVSFNEERFILKIPIDYNEAVGDE 664
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5713728 5717176 - Lag0004642.1 Lac6g0673 610442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g0673 664 Pfam HCO3- transporter integral membrane domain 445 587 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Lac6g0673 664 Pfam HCO3- transporter integral membrane domain 195 371 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Lac6g0673 664 Pfam HCO3- transporter integral membrane domain 4 178 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Lac6g0673 664 PANTHER ANION EXCHANGE PROTEIN 3 634 IPR003020 GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER)
Lac6g0673 664 Gene3D Helical hairpin bin 15 57 - -
Lac6g0673 664 FunFam probable boron transporter 2 15 57 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0452 Lac-Chr10:3562649 Lac6g0673 Lac-Chr6:5713728 6.70E-216 transposed
Lac11g0438 Lac-Chr11:4476716 Lac6g0673 Lac-Chr6:5713728 5.30E-221 transposed
Lac11g0702 Lac-Chr11:7207509 Lac6g0673 Lac-Chr6:5713728 2.20E-255 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g0673 K24194 - csv:101220188 1210.67