Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac6g0690 | ATGTCAAAACCCTGGGGCGGAATCGGAGCCTGGGCTGCTGATGCCGAGCGTGCCGAGGCTGAGGAACGAGAGGCGCAAGCTGCGGCCGCTGCCTCCCAAGCAGAATCCAAGAATTTCCCTAGCCTTAGGGAAGCTGTCAACACCAAGCCCAAGAAGAAGAAGATGACGCTCTCGGAATTCACTATGGGGACCTTGACGGGTCCGGGCGCCGGCAGTAGGCAAACGGAGAGTCAGGGATTGACGCCGGAGGAGATGCTTCGGCTTCCGACTGGTCCCAAAGACCGTTCGGGTGAGGAAATGCGGTCTGGCCGGCTCGGTGGGGGATTTCCCAGTTACGATCGGCAGAGTATGCCTGCTGGTCGGTTTCGAGACCGTGATGAAGGCGATGGGTCTTGGGGTGGTGGTCGACGATCGTATGGTGGGTTCGACGAGGAACGCAGAGGTCCACCTCCTAGGGCTTCCAATTTCGATCAACCTTCGAGGGCTGACGAGGTGGATAATTGGGCAATGACGAAGAAATCTCCCACATTGGATTCAGGGCGACAAAACAGGTATGGGTCGCTAGGCGGTGGCATGGGTGGGATTGGTGGTGGTGGGATTGCATCTAGGGCTGACGAGGTCGATAACTGGGCAAGTTCGAAAAAGGCTATTCCATCGAGATCCTCCACATTTGGTTCTGGTTTCCGTGACCGTGAGGCGAATGAGCCCGATCGCTGGACTAGAGGCCGTTCACGTGATAGTGACACAGAACGACCCCGATTAGTACTGGATCCACCCAAAGGTAATGTCGTTACAAATGAAGCAACAAGGACGAACAAGCCAAGTCCTTTTGGAGCAGCAAGGCCAAGAGAGGAGGTTTTGGCTGAGAAGGGGTTGGACTGGAAGAAGCTGGATACAGAAATTGAGGCCAAAAGAACCAGTAGGCCAACCAGTGCTCACTCTAGCAGGCCTTCGAGTGCTCAATCCAGCCGTTCGGAGGGTCCAGGAATACAGGGCGTAGAAAATGTGGTGAAGCCGAGGCCAAAAGTCAATCCATTTGGGGATGCCAAACCTAGGGAAGTTTTGCTGGAGGAACGTGGCAAGGACTGGCGAAAGATAGATCTGCAACTTGAGCATCGTGCTGTCGACAGGCCTGAAACAGAAGAAGAAAAGATGTTGAAAGAGGAAATTGATGTTCTAAGAAAGGAACTTGAGGAAGGCTTATCTCTGAATACTAACAAAGAATCGGTGCAAGAATCTGCTGGAGAGATGCAAGATCTGCGTGACAGAATAAGTAAAAAAGAACGTGAACTGGAGACACTGGTCCTTGATTTGGATGATAAAATTCGCTTCGGGAAGAAAGCCACTGAGAGACCTGGCTCTGGAGCAGGTAGGGCTGCCGTCTTTCCAGAAAGACCACCTTCTCAAGGATCCTTTGATGAGTCCAGAAGTTTTGAGTCTATAGACCGGCCTCGATCACGTGGCACTGGCACTGCAGATGTATGGAGTAGATCTGCTGATGATAGAAAACCAATCCAAGGTGCCAGAGATAGAGGATTTTTGGGCAACAGAGACATGGAGAGGTCGAGGGATAGATGGTAA | 1581 | 52.44 | MSKPWGGIGAWAADAERAEAEEREAQAAAAASQAESKNFPSLREAVNTKPKKKKMTLSEFTMGTLTGPGAGSRQTESQGLTPEEMLRLPTGPKDRSGEEMRSGRLGGGFPSYDRQSMPAGRFRDRDEGDGSWGGGRRSYGGFDEERRGPPPRASNFDQPSRADEVDNWAMTKKSPTLDSGRQNRYGSLGGGMGGIGGGGIASRADEVDNWASSKKAIPSRSSTFGSGFRDREANEPDRWTRGRSRDSDTERPRLVLDPPKGNVVTNEATRTNKPSPFGAARPREEVLAEKGLDWKKLDTEIEAKRTSRPTSAHSSRPSSAQSSRSEGPGIQGVENVVKPRPKVNPFGDAKPREVLLEERGKDWRKIDLQLEHRAVDRPETEEEKMLKEEIDVLRKELEEGLSLNTNKESVQESAGEMQDLRDRISKKERELETLVLDLDDKIRFGKKATERPGSGAGRAAVFPERPPSQGSFDESRSFESIDRPRSRGTGTADVWSRSADDRKPIQGARDRGFLGNRDMERSRDRW | 526 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 5857859 | 5862681 | - | Lag0004659.1 | Lac6g0690 | 610459 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac6g0690 | 526 | MobiDBLite | consensus disorder prediction | 496 | 526 | - | - | |
Lac6g0690 | 526 | MobiDBLite | consensus disorder prediction | 1 | 351 | - | - | |
Lac6g0690 | 526 | MobiDBLite | consensus disorder prediction | 447 | 526 | - | - | |
Lac6g0690 | 526 | MobiDBLite | consensus disorder prediction | 230 | 255 | - | - | |
Lac6g0690 | 526 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B | 1 | 446 | IPR010433 | GO:0003729(PANTHER)|GO:0003743(InterPro)|GO:0003743(PANTHER) | |
Lac6g0690 | 526 | MobiDBLite | consensus disorder prediction | 59 | 81 | - | - | |
Lac6g0690 | 526 | MobiDBLite | consensus disorder prediction | 118 | 132 | - | - | |
Lac6g0690 | 526 | Pfam | Plant specific eukaryotic initiation factor 4B | 1 | 512 | IPR010433 | GO:0003743(InterPro) | |
Lac6g0690 | 526 | MobiDBLite | consensus disorder prediction | 214 | 228 | - | - | |
Lac6g0690 | 526 | Coils | Coil | 15 | 37 | - | - | |
Lac6g0690 | 526 | MobiDBLite | consensus disorder prediction | 310 | 329 | - | - | |
Lac6g0690 | 526 | MobiDBLite | consensus disorder prediction | 283 | 309 | - | - | |
Lac6g0690 | 526 | Coils | Coil | 410 | 437 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac6g0690 | Lac-Chr6:5857859 | Lac9g1791 | Lac-Chr9:37652527 | 8.80E-32 | dispersed | |
Lac6g0690 | Lac-Chr6:5857859 | Lac4g1339 | Lac-Chr4:31587882 | 1.30E-35 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac6g0690 | K03258 | - | csv:101206526 | 856.284 |