Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g0690 ATGTCAAAACCCTGGGGCGGAATCGGAGCCTGGGCTGCTGATGCCGAGCGTGCCGAGGCTGAGGAACGAGAGGCGCAAGCTGCGGCCGCTGCCTCCCAAGCAGAATCCAAGAATTTCCCTAGCCTTAGGGAAGCTGTCAACACCAAGCCCAAGAAGAAGAAGATGACGCTCTCGGAATTCACTATGGGGACCTTGACGGGTCCGGGCGCCGGCAGTAGGCAAACGGAGAGTCAGGGATTGACGCCGGAGGAGATGCTTCGGCTTCCGACTGGTCCCAAAGACCGTTCGGGTGAGGAAATGCGGTCTGGCCGGCTCGGTGGGGGATTTCCCAGTTACGATCGGCAGAGTATGCCTGCTGGTCGGTTTCGAGACCGTGATGAAGGCGATGGGTCTTGGGGTGGTGGTCGACGATCGTATGGTGGGTTCGACGAGGAACGCAGAGGTCCACCTCCTAGGGCTTCCAATTTCGATCAACCTTCGAGGGCTGACGAGGTGGATAATTGGGCAATGACGAAGAAATCTCCCACATTGGATTCAGGGCGACAAAACAGGTATGGGTCGCTAGGCGGTGGCATGGGTGGGATTGGTGGTGGTGGGATTGCATCTAGGGCTGACGAGGTCGATAACTGGGCAAGTTCGAAAAAGGCTATTCCATCGAGATCCTCCACATTTGGTTCTGGTTTCCGTGACCGTGAGGCGAATGAGCCCGATCGCTGGACTAGAGGCCGTTCACGTGATAGTGACACAGAACGACCCCGATTAGTACTGGATCCACCCAAAGGTAATGTCGTTACAAATGAAGCAACAAGGACGAACAAGCCAAGTCCTTTTGGAGCAGCAAGGCCAAGAGAGGAGGTTTTGGCTGAGAAGGGGTTGGACTGGAAGAAGCTGGATACAGAAATTGAGGCCAAAAGAACCAGTAGGCCAACCAGTGCTCACTCTAGCAGGCCTTCGAGTGCTCAATCCAGCCGTTCGGAGGGTCCAGGAATACAGGGCGTAGAAAATGTGGTGAAGCCGAGGCCAAAAGTCAATCCATTTGGGGATGCCAAACCTAGGGAAGTTTTGCTGGAGGAACGTGGCAAGGACTGGCGAAAGATAGATCTGCAACTTGAGCATCGTGCTGTCGACAGGCCTGAAACAGAAGAAGAAAAGATGTTGAAAGAGGAAATTGATGTTCTAAGAAAGGAACTTGAGGAAGGCTTATCTCTGAATACTAACAAAGAATCGGTGCAAGAATCTGCTGGAGAGATGCAAGATCTGCGTGACAGAATAAGTAAAAAAGAACGTGAACTGGAGACACTGGTCCTTGATTTGGATGATAAAATTCGCTTCGGGAAGAAAGCCACTGAGAGACCTGGCTCTGGAGCAGGTAGGGCTGCCGTCTTTCCAGAAAGACCACCTTCTCAAGGATCCTTTGATGAGTCCAGAAGTTTTGAGTCTATAGACCGGCCTCGATCACGTGGCACTGGCACTGCAGATGTATGGAGTAGATCTGCTGATGATAGAAAACCAATCCAAGGTGCCAGAGATAGAGGATTTTTGGGCAACAGAGACATGGAGAGGTCGAGGGATAGATGGTAA 1581 52.44 MSKPWGGIGAWAADAERAEAEEREAQAAAAASQAESKNFPSLREAVNTKPKKKKMTLSEFTMGTLTGPGAGSRQTESQGLTPEEMLRLPTGPKDRSGEEMRSGRLGGGFPSYDRQSMPAGRFRDRDEGDGSWGGGRRSYGGFDEERRGPPPRASNFDQPSRADEVDNWAMTKKSPTLDSGRQNRYGSLGGGMGGIGGGGIASRADEVDNWASSKKAIPSRSSTFGSGFRDREANEPDRWTRGRSRDSDTERPRLVLDPPKGNVVTNEATRTNKPSPFGAARPREEVLAEKGLDWKKLDTEIEAKRTSRPTSAHSSRPSSAQSSRSEGPGIQGVENVVKPRPKVNPFGDAKPREVLLEERGKDWRKIDLQLEHRAVDRPETEEEKMLKEEIDVLRKELEEGLSLNTNKESVQESAGEMQDLRDRISKKERELETLVLDLDDKIRFGKKATERPGSGAGRAAVFPERPPSQGSFDESRSFESIDRPRSRGTGTADVWSRSADDRKPIQGARDRGFLGNRDMERSRDRW 526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5857859 5862681 - Lag0004659.1 Lac6g0690 610459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g0690 526 MobiDBLite consensus disorder prediction 496 526 - -
Lac6g0690 526 MobiDBLite consensus disorder prediction 1 351 - -
Lac6g0690 526 MobiDBLite consensus disorder prediction 447 526 - -
Lac6g0690 526 MobiDBLite consensus disorder prediction 230 255 - -
Lac6g0690 526 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 446 IPR010433 GO:0003729(PANTHER)|GO:0003743(InterPro)|GO:0003743(PANTHER)
Lac6g0690 526 MobiDBLite consensus disorder prediction 59 81 - -
Lac6g0690 526 MobiDBLite consensus disorder prediction 118 132 - -
Lac6g0690 526 Pfam Plant specific eukaryotic initiation factor 4B 1 512 IPR010433 GO:0003743(InterPro)
Lac6g0690 526 MobiDBLite consensus disorder prediction 214 228 - -
Lac6g0690 526 Coils Coil 15 37 - -
Lac6g0690 526 MobiDBLite consensus disorder prediction 310 329 - -
Lac6g0690 526 MobiDBLite consensus disorder prediction 283 309 - -
Lac6g0690 526 Coils Coil 410 437 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac6g0690 Lac-Chr6:5857859 Lac9g1791 Lac-Chr9:37652527 8.80E-32 dispersed
Lac6g0690 Lac-Chr6:5857859 Lac4g1339 Lac-Chr4:31587882 1.30E-35 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g0690 K03258 - csv:101206526 856.284