Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g0729 ATGTACTTGTCTGATAAGCCTCGCCCAATCGATATTTACAAGGAAGAAGGTAGCAGAGAGATGATGATCGAGGTCGCCTCCAATGGCGACCACCATATTCAACCTCATCAGCAGCAGCAGCAGCAGCAACAGACTCATCAGCAGCATCAAATGATGCTTGGCGATAGCAGTGGGGAGGATCATGAAGTCAAGGCTCCGAAGAAGCGGGCGGAGACTTGGGTTCAGGACGAGACTCGAAGCTTAATTGCCCTACGACGGGAGATGGATGGCTTGTTCAATACCTCCAAATCGAACAAGCATTTGTGGGAGCAGATATCGGCTAAGATGAGGGAAAGGGGATTCGATCGCTCTCCGACTATGTGTACTGATAAGTGGAGGAACTTGCTTAAGGAGTTCAAGAAGGCTAAGCACCATGACAGGGGAAGTGGCTCTGCTAAGATGTCGTATTACAAGGAGATTGAAGAAATTTTGAAGGAGAGAAGCAAAAATGCGCAGTACAAAAGCCCCACGCCACCCAAGATTGATTCATATATGCAATTCTCAGACAAAGGAATTGAGGATAATGGTCTATCGTTCGGACCTGTTGAAGCTGGTGGCAGGCCCTCACTCAATCTTGAAAGACAGCTAGATCACGATGGACATCCTCTTGCTATCACAGCAGCTGATGCAGTTGCTGCAACGGGCATTCCACCTTGGAATTGGAGAGAGGCACCTGGAAATGGTGGGGAGAGTCAGGCATTTGGCGGGAGAGTTATATCAGTCAAGTGGGGGGACTACACAAGAAGAATTGGTATTGATGGCACTTCGGATGCCATCAAGGAGGCAATCAAGTCTGCTTTTAGGTTGAGGACTAAACGTGCATTTTGGTTAGAGGACGAGGACCAGGTTGTCAGAAGTCTGGACAGGGACATGCCTTTAGGAAATTACACTCTTCACCTTGATGAAGGGTTGGCTGTCAAAATCTGTGTCTATGATGAATCTGACCACTTACCCGTACATACTGAAGAGAAGATTTTTTACGTTGAAGATGATTTCCGAGATTTTTTAGCTCGTCGGGGCTGGACATGCCTTCGGGAGTTTGATGGGTATAGAAACATCGATAATATGGATGACCTCCGTCCTGGTGCAATATACCGCGGTGTAAGTTGA 1149 47.43 MYLSDKPRPIDIYKEEGSREMMIEVASNGDHHIQPHQQQQQQQQTHQQHQMMLGDSSGEDHEVKAPKKRAETWVQDETRSLIALRREMDGLFNTSKSNKHLWEQISAKMRERGFDRSPTMCTDKWRNLLKEFKKAKHHDRGSGSAKMSYYKEIEEILKERSKNAQYKSPTPPKIDSYMQFSDKGIEDNGLSFGPVEAGGRPSLNLERQLDHDGHPLAITAADAVAATGIPPWNWREAPGNGGESQAFGGRVISVKWGDYTRRIGIDGTSDAIKEAIKSAFRLRTKRAFWLEDEDQVVRSLDRDMPLGNYTLHLDEGLAVKICVYDESDHLPVHTEEKIFYVEDDFRDFLARRGWTCLREFDGYRNIDNMDDLRPGAIYRGVS 382
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6193518 6196982 + Lag0004698.1 Lac6g0729 610498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g0729 382 ProSiteProfiles Myb-like domain profile. 65 129 IPR001005 -
Lac6g0729 382 Pfam Myb/SANT-like DNA-binding domain 72 156 IPR044822 -
Lac6g0729 382 MobiDBLite consensus disorder prediction 31 54 - -
Lac6g0729 382 FunFam trihelix transcription factor GT-1 73 135 - -
Lac6g0729 382 MobiDBLite consensus disorder prediction 30 72 - -
Lac6g0729 382 PANTHER FI21293P1 36 374 - -
Lac6g0729 382 CDD GT1 71 136 - -
Lac6g0729 382 SMART sant 69 131 IPR001005 -
Lac6g0729 382 Gene3D - 73 135 - -
Lac6g0729 382 MobiDBLite consensus disorder prediction 55 72 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac6g0729 Lac-Chr6:6193518 Lac9g0286 Lac-Chr9:4524302 8.40E-08 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
24012 PF13837 Myb_DNA-bind_4 2.90E-21 CL0123 Lac TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g0729 - - - 0.0