Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g0758 ATGGCGGAAGAGGAATCCGGAGAGGTCATCCGGCCGCAATTTCCGACGGGACGAGTGAAGAAGATAATGAAGATCGACAAGGACGTCGGCAAAGTGAACTCAGAAGCACTGTTTATCGTCTCATGCGCCACCGAGCTCTTCCTCAAGCTTCTCGCTGAAAAATCTGCAGAAGTCGCCGTCGAGAAGAAACGGAAGACCGTGAAGCTCGAACACATCCGAGTCGCCGTCAAAAGGCATCGATCGATCAGTGATTTTCTCCTCGATTCGCTTCCTCTTCCACCTCAGACGTCGGATGCTCCGTCGAAGGACGAGAATCGCCCTCGCACTGTCGTTGATAAAGGGCCTCCTGAAGGAACCCGTCGAATCGATGATTTCTTTCGCCGGTCAGCAAAGACAACGTCGGCGGAGACCAATGAGTCATAG 423 53.19 MAEEESGEVIRPQFPTGRVKKIMKIDKDVGKVNSEALFIVSCATELFLKLLAEKSAEVAVEKKRKTVKLEHIRVAVKRHRSISDFLLDSLPLPPQTSDAPSKDENRPRTVVDKGPPEGTRRIDDFFRRSAKTTSAETNES 140
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6443750 6444172 - Lag0004727.1 Lac6g0758 610527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g0758 140 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 13 76 IPR003958 -
Lac6g0758 140 Gene3D Histone, subunit A 1 91 IPR009072 GO:0046982(InterPro)
Lac6g0758 140 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 11 109 IPR050568 GO:0000976(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)
Lac6g0758 140 MobiDBLite consensus disorder prediction 87 140 - -
Lac6g0758 140 MobiDBLite consensus disorder prediction 101 130 - -
Lac6g0758 140 SUPERFAMILY Histone-fold 10 94 IPR009072 GO:0046982(InterPro)
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
24013 PF00808 CBFD_NFYB_HMF 1.40E-19 CL0012 Lac TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g0758 - - - 0.0