Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g0769 ATGGACGACGGAGGAGCTTCTCAGCCGGACGACACCGTCATGTCGGAGGCGGCGGCTGTTCCGCCGCCGCAGCATGACCCGGCGGCGCACCCTCAGCACCAGCCGCCGCCGATGGGGATGGAAAATATCCCGGCGACTTTGAGCCATGGAGGGAGATTCATTCAGTACAACATCTTTGGTAACATCTTTGAAGTTACGGCTAAGTACAAGCCTCCCATCATGCCTATTGGCAAAGGCGCTTACGGCATCGTCTGTTCTGCTCTCAACTCCGAGACGAACGAGCACGTGGCGATCAAGAAGATTGCTAATGCGTTTGACAACAAGATCGATGCTAAGAGAACTCTTCGTGAGATTAAGCTGCTTCGACACATGGATCATGAAAACGTTGTTGCAATTAGGGATATCATACCTCCACCTTTAAGGGAAACATTTAATGATGTTTATATAGCATACGAGCTAATGGATACTGACCTTCATCAAATAATTCGTTCAAACCAAGCATTATCAGAGGAGCATTGTCAGTACTTCCTGTACCAGATTCTTCGTGGGTTGAAGTACATACATTCAGCAAATGTTCTGCATAGAGATTTGAAGCCTTCCAATCTGCTATTAAATGCCAACTGTGACCTGAAAATATGTGATTTTGGACTTGCTCGTGTTACTTCTGAAACTGACTTTATGACAGAATATGTGGTTACAAGATGGTACCGTGCTCCAGAGCTCTTGCTTAACTCATCTGATTACACAGCAGCTATTGATGTCTGGTCTGTTGGTTGTATTTTTATGGAACTGATGGATCGGAAGCCCTTGTTTCCTGGTCGAGATCATGTTCATCAATTACGTTTGCTTTTGGAGCTGATTGGCACTCCATCAGAGGCTGATCTTGGTTTTTTGAACGAGAACGCTAAAAGATACATACGGCAACTTCCTCATTACCATCGGCAGTCATTCACTGAAAAGTTTCCACATGTCCATCCTGCAGCCATTGATCTGGTGGAGAAGATGCTAACATTTGATCCAGGGCAGAGAATTACCGTTGAAGATGCTCTAGCTCATCCTTATCTGACTTCATTACATGACATTAGTGATGAGCCTGTCTGCATGATGCCCTTCAGCTTCGATTTCGAGCAGCATGCGCTTACCGAGGAACAGATGAAAGAGCTGATCTACCGAGAGGCACTCGCATTTAACCCCGAGTGCCTTGATTCAAGGCTTGATTCTACCATTCTGTTTACCTCCAATCAGCTGGATTTGGAAGACAGAGGCTTCTGGAGAATGAATTTGTTGCAAAATGAAGCCAATGACGCCAGGTTCATATCGACGACGAAACTTAATCGTGGCTCGAATTACTTTGACCATCTATGGTGTTTTCGGAATTGA 1380 45.58 MDDGGASQPDDTVMSEAAAVPPPQHDPAAHPQHQPPPMGMENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLLELIGTPSEADLGFLNENAKRYIRQLPHYHRQSFTEKFPHVHPAAIDLVEKMLTFDPGQRITVEDALAHPYLTSLHDISDEPVCMMPFSFDFEQHALTEEQMKELIYREALAFNPECLDSRLDSTILFTSNQLDLEDRGFWRMNLLQNEANDARFISTTKLNRGSNYFDHLWCFRN 459
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6538774 6547833 + Lag0004738.1 Lac6g0769 610538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g0769 459 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 63 393 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Lac6g0769 459 ProSiteProfiles Protein kinase domain profile. 70 355 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac6g0769 459 Pfam Protein kinase domain 75 355 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac6g0769 459 SMART serkin_6 70 355 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac6g0769 459 SUPERFAMILY Protein kinase-like (PK-like) 75 363 IPR011009 -
Lac6g0769 459 FunFam Mitogen-activated protein kinase 154 382 - -
Lac6g0769 459 Gene3D Transferase(Phosphotransferase) domain 1 154 382 - -
Lac6g0769 459 MobiDBLite consensus disorder prediction 24 38 - -
Lac6g0769 459 Gene3D Phosphorylase Kinase; domain 1 53 392 - -
Lac6g0769 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac6g0769 459 FunFam Mitogen-activated protein kinase 55 164 - -
Lac6g0769 459 CDD STKc_TEY_MAPK 63 398 - -
Lac6g0769 459 ProSitePatterns MAP kinase signature. 105 208 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac6g0769 459 ProSitePatterns Protein kinases ATP-binding region signature. 76 100 IPR017441 GO:0005524(InterPro)
Lac6g0769 459 MobiDBLite consensus disorder prediction 1 42 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac12g1654 Lac-Chr12:31883864 Lac6g0769 Lac-Chr6:6538774 3.40E-163 dispersed
Lac6g0769 Lac-Chr6:6538774 Lac7g2604 Lac-Chr7:44458702 5.50E-155 dispersed
Lac7g2614 Lac-Chr7:44676305 Lac6g0769 Lac-Chr6:6538774 6.80E-172 transposed
Lac10g0120 Lac-Chr10:912014 Lac6g0769 Lac-Chr6:6538774 1.20E-42 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86258 PF00069 Pkinase 4.90E-73 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g0769 K14512 - csv:101204301 770.77