Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g0798 ATGTCTTCAACCGAGAAGGAGAGAGAGACCCAGGTCTACATGGCCAAGCTTGCTGAGCAGGCCGAGCGCTATGACGAAATGGTCGAGTGTATGAAGAATATTGCGAAGCTTGACCTCGAACTAACTGTGGAGGAGAGGAACCTTCTTTCTGTGGGGTACAAAAATGGTTACCGCCAGAAAGTAGAGGAGGAGCTTTCAAAGATTTGTGGTGATATTCTCTCTATCATAGACAAGCATTTAATCCCTCATTCTTCCTCTGCAGAAGCCACTGTTTTCTACTACAAGATGAAAGGTGACTACTATCGTTATCTTGCTGAGTTCAAGACAGATCAAGATAGAAAAGAGGCTGCTGATCAGTCGTTGAAGGGATATGAGGCAGCCTCAGGCACTGCGAATACCGAACTCCCATCAACCCACCCCATCCGTCTTGGTCTTGCTCTCAATTTTTCTGTCTTCTACTATGAGATTATGAACTCTCCTGAGAGAGCTTGCCATTTGGCTAAACAAGCTTTTGATGAGGCAATTGCAGAGTTGGATACCTTGAGTGAGGAATCATACAAGGACAGCACTCTGATCATGCAGCTGTTGAGAGACAACCTCACCCTCTGGACCTCAGATTTGCCTGAAGATGGCGGTGAAGACAACTTCAAAGCTGAGGATTCCAAGCCTGCTGAACCTGAGGCGGCCCAGCAAGCCAAATGA 702 46.87 MSSTEKERETQVYMAKLAEQAERYDEMVECMKNIAKLDLELTVEERNLLSVGYKNGYRQKVEEELSKICGDILSIIDKHLIPHSSSAEATVFYYKMKGDYYRYLAEFKTDQDRKEAADQSLKGYEAASGTANTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEDNFKAEDSKPAEPEAAQQAK 233
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 6836645 6838898 - Lag0004767.1 Lac6g0798 610567
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac6g0798 233 SMART 1433_4 8 217 IPR023410 -
Lac6g0798 233 PANTHER 14-3-3 PROTEIN 7 55 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Lac6g0798 233 MobiDBLite consensus disorder prediction 210 226 - -
Lac6g0798 233 SUPERFAMILY 14-3-3 protein 7 206 IPR036815 -
Lac6g0798 233 Coils Coil 14 34 - -
Lac6g0798 233 PIRSF 14-3-3 55 217 IPR000308 -
Lac6g0798 233 PIRSF 14-3-3 2 57 IPR000308 -
Lac6g0798 233 Gene3D - 1 55 IPR036815 -
Lac6g0798 233 Gene3D - 56 216 IPR036815 -
Lac6g0798 233 ProSitePatterns 14-3-3 proteins signature 2. 186 205 IPR023409 -
Lac6g0798 233 PRINTS 14-3-3 protein zeta signature 177 206 IPR000308 -
Lac6g0798 233 PRINTS 14-3-3 protein zeta signature 88 110 IPR000308 -
Lac6g0798 233 PRINTS 14-3-3 protein zeta signature 123 149 IPR000308 -
Lac6g0798 233 PRINTS 14-3-3 protein zeta signature 150 176 IPR000308 -
Lac6g0798 233 PRINTS 14-3-3 protein zeta signature 57 81 IPR000308 -
Lac6g0798 233 Coils Coil 164 184 - -
Lac6g0798 233 MobiDBLite consensus disorder prediction 206 233 - -
Lac6g0798 233 Pfam 14-3-3 protein 14 55 IPR023410 -
Lac6g0798 233 Pfam 14-3-3 protein 56 204 IPR023410 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g0369 Lac-Chr13:2618890 Lac6g0798 Lac-Chr6:6836645 4.10E-110 dispersed
Lac6g0798 Lac-Chr6:6836645 Lac6g0913 Lac-Chr6:8083447 1.60E-73 dispersed
Lac6g0798 Lac-Chr6:6836645 Lac6g0892 Lac-Chr6:7867681 1.30E-88 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g0798 K06630 - csv:101221858 432.18