Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g0802 ATGACTATGCTAGGGGTAAAGAAGAGAGGCCATGGAAACCGTTCTTGGATAAAGATTGATCAGGAAGGGAACTCGGAGGTTTTGGAACTTGAAAAGGCTACAATAATGAAGCATTGTTCTTTACCTTCAAGAGATATGCGACTTTTAGATCCCCTCTTCCTTTGTCCATCTACAATTCTTGGAAGGGAGAAGGCAATTGTTGTCAGTCTCGAGCAAATTCGGTGTATAATCACATCTGATGAGGTTATTCTAATGAACTCCATAGATGGATGTGCTGCACAGTACAAGTCAGAACTATGCAAGCGTCTCCATGCAAATAAAGATCAATCAGATGATTTGCCCTTTGAATTTAGGGCACTGGAGCTGGCGCTGGAACTGACTTGCTCATTTCTTGACACTCAGGTGAAGGGGATGGAAATGGAGATATACCCTCTGCTGGATGATTTAGCATCTTCAATAAACACCCTTAATCTCGAAAGAGTTCGAAGATTTAAAGGCAACCTTCTGACCTTGACTCAACAAGTGCAAAAGGTACATGATGAAATTGAACATCTGATGGATGATGATGGGGACATGGCTGAGATGCATCTGACAGAGAAGAAACAAAGATTGGAAGCTAACATCCGAAGTAACTTGTATCTCGAAACTAGTTTCTTCGGGAAACAGCTACCGAAATCAGCTCCTGTTTCGCCAGTGGGTTCTACCAATGGATCTTATAAATTACAAAGGGCTTTTAGCAGCATTGTGAACTCAAGCAGCTTGATGAGTTCATCGAACAATGGTGATAACGTCGAACAATTGGAGATGCTGCTCGAGGCATACTTCGTGGTCATTGACGACATGCTCAGTAAATTATTATCACTCAAAGAATCTATAGATGACACAGAAGATCTGATCAACATTAAACTGGGCAATGTTCAGAACCAGCTGATACAATTTCAGTTGCTTTTTACTGCAGCTACATTCTTGGCTACGATGTTTGCGGCTTTAACCGCAGTTTTTGGCATGAATTTTCTCGACGACGTCTTCAACCATCCGACTTCTTTCATGTGGATAGTTTACTTTACCTTGATTGCCTGTGGCCTTGTGTATCTCTCTTTTCTATTCTATTTTAGGTACAAGAAAATCTTCCCATTGTAA 1140 41.14 MTMLGVKKRGHGNRSWIKIDQEGNSEVLELEKATIMKHCSLPSRDMRLLDPLFLCPSTILGREKAIVVSLEQIRCIITSDEVILMNSIDGCAAQYKSELCKRLHANKDQSDDLPFEFRALELALELTCSFLDTQVKGMEMEIYPLLDDLASSINTLNLERVRRFKGNLLTLTQQVQKVHDEIEHLMDDDGDMAEMHLTEKKQRLEANIRSNLYLETSFFGKQLPKSAPVSPVGSTNGSYKLQRAFSSIVNSSSLMSSSNNGDNVEQLEMLLEAYFVVIDDMLSKLLSLKESIDDTEDLINIKLGNVQNQLIQFQLLFTAATFLATMFAALTAVFGMNFLDDVFNHPTSFMWIVYFTLIACGLVYLSFLFYFRYKKIFPL 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6877473 6880983 - Lag0004771.1 Lac6g0802 610571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g0802 379 Pfam Magnesium transporter MRS2-like 19 205 - -
Lac6g0802 379 Gene3D Magnesium transport protein CorA, transmembrane region 90 310 - -
Lac6g0802 379 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 6 376 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
Lac6g0802 379 Gene3D - 3 88 - -
Lac6g0802 379 FunFam Magnesium transporter MRS2-1 4 87 - -
Lac6g0802 379 CDD Mrs2_Mfm1p-like 16 376 IPR039204 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0588 Lac-Chr11:5970602 Lac6g0802 Lac-Chr6:6877473 3.30E-101 dispersed
Lac12g0153 Lac-Chr12:1701823 Lac6g0802 Lac-Chr6:6877473 9.40E-60 dispersed
Lac12g2225 Lac-Chr12:39424886 Lac6g0802 Lac-Chr6:6877473 2.80E-49 dispersed
Lac5g2479 Lac-Chr5:43360329 Lac6g0802 Lac-Chr6:6877473 4.10E-20 dispersed
Lac5g2480 Lac-Chr5:43364428 Lac6g0802 Lac-Chr6:6877473 1.70E-29 dispersed
Lac6g0802 Lac-Chr6:6877473 Lac11g2650 Lac-Chr11:42485541 6.70E-66 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g0802 K16075 - csv:101220835 640.188