Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g0895 ATGAGACGAGAGAAGAATGAGAGCGCTCAAAACAGCGAGGGGAAATCTCTCAAAGGGGTGATGTTCTTCACTGCATCTTCCGGCGAAAATGAGGTTAGATTTTCAGAGAAGCTTCAGAAACCCAAAAAATCTCTCCCTGGTTTGCAGTCCTCGGCAAGTTCCCGCGCACTCCGACTGCTTTTGTGTTGCGGGCGGTTCGTTTCCAATAGGTCCCCAGGAAAATTTTTGAGCTATATCATTCAGTGGAAGACAATGGATTCGATAGCAGAAGAGAAAACAACAATAAATTGGGAATCAAAATTGGGATTAAGAGATGAACTTGCTGCCGAGACGCTTTCTTCTGAGCCTCATTCTCACGTAATTTCTCCTATGTTCATCGCCCCACTAAGCAGCGTCGACGCCTTTAGCGAGAATCACTGCCGGAGGGTGTTGAAAAGGGCATTTGGATCGCTAAGAGGGGATTTTGGTGGCGATGAAGAACTGAGAAGCGAGCGGCAGAGCGGTGGTGGGGCAGAGGAGAATGTGGTTGAGCATTCGAAGAGAGGCTCCGACGGCGACGGGAGGAGGCTCAAGCGAGTGGGAAGAAGAAGAGAGAAGGTGAGGGAGAGAGGAGGGTTTCGGCTCGGAGGAGAAACAGGGGAGATTGACGTCACAGTCCCCACACGGACCGTCACCAACGCCTTTTTCTTTTGGTCTCATTTCCTTCCTTGTGTTTCCCATCACGCCGCTGATTCAACATCAAAACCATCCAACGGCTCATATCGTCCAACACGAGACTCAACGCTCAAAACCCAATCGCAGCCGTCCACAACACCCAAGATTCTCCACTACACTCCATCCGACGGTCACCACACGAACTACAGTGTATTAGGAAGCGGTTATAGAGCTCCGGCCATGGAGAAGGAGAGGGAGCAGCTTGTTTACTTGGCCAGACTTGCCGAACAAGCAGAGAGATACGACGTAACATCACAATTTGATAAGCTAAGGGCCATTCGGTTTCAAGATATCATAAACAAAGCAGTACCAAGAAGAAAACCAAACCAAGTTAATAAACCACGTTCTGCAAATGCCCCTGAATATAATAATACGGAGCTGAGGGAACCTGATAATTTTGAGCATCAACCTGTCCGAGCCCAACAGCAACTGTTGGATGACGAAACTCGTGCACTTCAGGTTGAATTGACTAGTCTACTTGACGCAGTACAGGAAACAGAAACTAAGATGGTAGAGATGTCTGCTTTGAATCACCTAATGTCTACGCACGTTTTGCAGCAAGCACAACAAATTGAACTTCTTTATGAACAGGCTATTGAAGCTACGAAGAATGTTGAGCTCGGAGTGAACTCATTTGCTACTTCAATTTCTCAAAGTGCCCTGCATTCATTTGTAGCTGCTGAAGCATGA 1404 47.58 MRREKNESAQNSEGKSLKGVMFFTASSGENEVRFSEKLQKPKKSLPGLQSSASSRALRLLLCCGRFVSNRSPGKFLSYIIQWKTMDSIAEEKTTINWESKLGLRDELAAETLSSEPHSHVISPMFIAPLSSVDAFSENHCRRVLKRAFGSLRGDFGGDEELRSERQSGGGAEENVVEHSKRGSDGDGRRLKRVGRRREKVRERGGFRLGGETGEIDVTVPTRTVTNAFFFWSHFLPCVSHHAADSTSKPSNGSYRPTRDSTLKTQSQPSTTPKILHYTPSDGHHTNYSVLGSGYRAPAMEKEREQLVYLARLAEQAERYDVTSQFDKLRAIRFQDIINKAVPRRKPNQVNKPRSANAPEYNNTELREPDNFEHQPVRAQQQLLDDETRALQVELTSLLDAVQETETKMVEMSALNHLMSTHVLQQAQQIELLYEQAIEATKNVELGVNSFATSISQSALHSFVAAEA 467
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7895180 7899769 - Lag0004864.1 Lac6g0895 610664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g0895 467 MobiDBLite consensus disorder prediction 243 282 - -
Lac6g0895 467 MobiDBLite consensus disorder prediction 349 363 - -
Lac6g0895 467 PANTHER SYNTAXIN-18 320 455 - GO:0005783(PANTHER)|GO:0006890(PANTHER)|GO:0031201(PANTHER)
Lac6g0895 467 MobiDBLite consensus disorder prediction 342 371 - -
Lac6g0895 467 MobiDBLite consensus disorder prediction 174 191 - -
Lac6g0895 467 MobiDBLite consensus disorder prediction 241 282 - -
Lac6g0895 467 MobiDBLite consensus disorder prediction 158 198 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac4g2818 Lac-Chr4:46812422 Lac6g0895 Lac-Chr6:7895180 1.40E-57 dispersed
Lac6g0895 Lac-Chr6:7895180 Lac8g2909 Lac-Chr8:46209678 3.50E-72 dispersed
Lac6g0892 Lac-Chr6:7867681 Lac6g0895 Lac-Chr6:7895180 1.20E-130 proximal
Lac6g0893 Lac-Chr6:7872090 Lac6g0895 Lac-Chr6:7895180 1.20E-28 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g0895 K08492 - csv:101207161 232.646