Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g0913 ATGGCTGCCGCCCCCTCTGTTCGTGAGGAGAATGTTTACATGGCCAAGCTTGCCGAGCAGGCCGAGCGCTACGAGGAGATGGTCGAGTTCATGGAGAAGGTCTCTGCTTCCATCGACAAGGAGGAGCTTACCGTCGAGGAGAGAAACCTCCTCTCCGTTGCCTACAAGAACGTCATCGGCGCTCGCAGGGCTTCCTGGCGTATCATTTCCTCCATCGAGCAGAAGGAGGAGAGCCGAGGCAACGACGACCACGTCTCTGTCATCCGTGACTACAGATCCAAAATTGAGAGCGAGCTCTCCAATATCTGCGATGGAATCCTCAAACTCCTCGATTCCAGACTCATTCCCTCCGCCGCCTCCGGAGATTCCAAGGTCTTTTACCTCAAAATGAAGGGCGATTACCACAGATACCTCGCCGAATTCAAAACCGGTGCCGAACGGAAGGAAGCCGCCGAGAGTACCCTCACTGCCTACAAAGCCGCTCAGGATATTGCAAACGCTGAGTTGCCTCCTACACATCCGATCCGACTTGGATTGGCCCTTAACTTCTCTGTATTCTACTATGAAATTTTGAATTCTCCTGATCGTGCCTGCAGTCTTGCAAAACAGGCTTTTGATGAAGCTATCGCTGAGTTGGATACCCTTGGCGAGGAATCCTACAAAGATAGTACTTTGATCATGCAACTTCTTCGCGATAACCTCACCCTCTGGACCTCGGACATGCAGGATGACAACGCCGATGAGATTAAAGAAGCTCCTCCGAAGCGCGAGGATGAAAAGCAGTGA 786 52.16 MAAAPSVREENVYMAKLAEQAERYEEMVEFMEKVSASIDKEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSVIRDYRSKIESELSNICDGILKLLDSRLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDNADEIKEAPPKREDEKQ 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8083447 8085142 + Lag0004882.1 Lac6g0913 610682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g0913 261 MobiDBLite consensus disorder prediction 243 261 - -
Lac6g0913 261 Coils Coil 14 34 - -
Lac6g0913 261 SMART 1433_4 8 251 IPR023410 -
Lac6g0913 261 Gene3D - 2 251 IPR036815 -
Lac6g0913 261 FunFam 14-3-3 protein epsilon 4 251 - -
Lac6g0913 261 Pfam 14-3-3 protein 14 238 IPR023410 -
Lac6g0913 261 MobiDBLite consensus disorder prediction 242 261 - -
Lac6g0913 261 SUPERFAMILY 14-3-3 protein 8 240 IPR036815 -
Lac6g0913 261 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Lac6g0913 261 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Lac6g0913 261 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Lac6g0913 261 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Lac6g0913 261 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Lac6g0913 261 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Lac6g0913 261 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Lac6g0913 261 PIRSF 14-3-3 2 250 IPR000308 -
Lac6g0913 261 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Lac6g0913 261 PANTHER 14-3-3 PROTEIN 8 243 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac6g0798 Lac-Chr6:6836645 Lac6g0913 Lac-Chr6:8083447 1.60E-73 dispersed
Lac6g0892 Lac-Chr6:7867681 Lac6g0913 Lac-Chr6:8083447 2.10E-90 dispersed
Lac4g0500 Lac-Chr4:11554483 Lac6g0913 Lac-Chr6:8083447 4.00E-118 transposed
Lac6g1029 Lac-Chr6:9402343 Lac6g0913 Lac-Chr6:8083447 5.20E-99 transposed
Lac2g0741 Lac-Chr2:5702076 Lac6g0913 Lac-Chr6:8083447 2.60E-130 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g0913 K06630 - csv:101220164 504.212