Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g0985 ATGGCGCCGGGTTTTGACCTTGCTGTTTCGAACCTTTTATGCGCTGAAGACAATTGCATTTTCGATAATCACGATGATGATGATGAAACAGTAGTTGATGAGGAGTTTGTGGTGGCTCCTTATTTTCTTAGAAGTAGTGGGTCTCAGAGTCGTCGCTATCGGAGCCTCCACGGCGGCGGTTGCGGCGGCGATGGGTTCCCGTTTTTGAGCGATGAATGTTTGATTGGAATGGTTGAGAAGGAAACCCAGCACTTGCCTGTTGATGGGTATCTCGTGAAGTTGCAGAACGGCGAGTTGGATGTTGGAGCCAGAAAAGAGGCCGTCGATTGGATTGAAAAGGTGAGTGCTCATTTCAGTTTTGGACCTCTCTGTACATACTTAGCTGTAAACTACTTGGATCGTTTCCTCTCCGCTTACGATCTACCCAAAGGCAAAGCTTGGACAATGCAGTTGCTGGCTGTGGCATGTATGTCCCTAGCAGCCAAATTGGAGGAGACTGAAGTCCCACTCTCTTTGGATTTACAGGTGGGTGGATCAAAGTTTGTGTTTGAAGCAAGAACCATTGAAAGAATGGAGCTTTTAGTCTTGACCACATTGGGGTGGAGAATGCAAGCAGTTACCCCTTTCTCGTTTATCGATCATTACCTCCACAAGATTCACGACGACGAACTCGCTGTCAAAATGTCGATCACCCGATCGATACACCTACTCTTGACCATAATACAAGGGATCGACTTCTTGGAATTCAAGCCTTCTGAGATTGCAGCAGCTGTGGCAATATCAGTAGCTGGAGAAGCTCAAGCAGTGGACCCTGAAAGAGCCATTCCTCTTCTCATTCAGCAACTCCAAATGGAAAGAGTTCTGAAGTGCATTAAACTAATCAACGACATGTCGTTAGTCTGCGGGAGAGCGTCGATGTCGGAGCCCCGGAGCCCGAGCGGGGTGTTGGACGTGACGTGCTTGAGCTATAAAAGCAATGATACAGCAGTTGGGTCATGTGCAAACTCTTCACATCATAACAGCTCAGATGCTACAAAGAGGAGGAGACTGAACAGACCCTGTGAAGTGGAGCTATAG 1077 47.73 MAPGFDLAVSNLLCAEDNCIFDNHDDDDETVVDEEFVVAPYFLRSSGSQSRRYRSLHGGGCGGDGFPFLSDECLIGMVEKETQHLPVDGYLVKLQNGELDVGARKEAVDWIEKVSAHFSFGPLCTYLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAKLEETEVPLSLDLQVGGSKFVFEARTIERMELLVLTTLGWRMQAVTPFSFIDHYLHKIHDDELAVKMSITRSIHLLLTIIQGIDFLEFKPSEIAAAVAISVAGEAQAVDPERAIPLLIQQLQMERVLKCIKLINDMSLVCGRASMSEPRSPSGVLDVTCLSYKSNDTAVGSCANSSHHNSSDATKRRRLNRPCEVEL 358
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 8916746 8918720 - Lag0004954.1 Lac6g0985 610754
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac6g0985 358 Gene3D - 87 204 - -
Lac6g0985 358 SUPERFAMILY Cyclin-like 189 300 IPR036915 -
Lac6g0985 358 Pfam Cyclin, C-terminal domain 206 298 IPR004367 -
Lac6g0985 358 Pfam Cyclin, N-terminal domain 77 203 IPR006671 -
Lac6g0985 358 SUPERFAMILY Cyclin-like 68 203 IPR036915 -
Lac6g0985 358 CDD CYCLIN_AtCycD-like_rpt1 103 201 - -
Lac6g0985 358 SMART cyclin_7 109 197 IPR013763 -
Lac6g0985 358 FunFam D2/4-type cyclin 87 202 - -
Lac6g0985 358 CDD CYCLIN_AtCycD-like_rpt2 206 294 - -
Lac6g0985 358 Gene3D - 77 290 - -
Lac6g0985 358 FunFam D6-type cyclin 203 292 - -
Lac6g0985 358 SMART Cyclin_C_2 206 324 IPR004367 -
Lac6g0985 358 MobiDBLite consensus disorder prediction 332 352 - -
Lac6g0985 358 PANTHER CYCLINS 80 296 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g0233 Lac-Chr13:1657789 Lac6g0985 Lac-Chr6:8916746 4.90E-44 dispersed
Lac1g2603 Lac-Chr1:47369769 Lac6g0985 Lac-Chr6:8916746 2.40E-36 dispersed
Lac1g2790 Lac-Chr1:48993907 Lac6g0985 Lac-Chr6:8916746 1.90E-81 dispersed
Lac2g0355 Lac-Chr2:2675840 Lac6g0985 Lac-Chr6:8916746 6.50E-39 dispersed
Lac5g2566 Lac-Chr5:44214406 Lac6g0985 Lac-Chr6:8916746 6.50E-37 dispersed
Lac6g0280 Lac-Chr6:2263960 Lac6g0985 Lac-Chr6:8916746 1.70E-42 dispersed
Lac6g0985 Lac-Chr6:8916746 Lac9g2113 Lac-Chr9:40781493 1.70E-31 dispersed
Lac6g0985 Lac-Chr6:8916746 Lac6g0031 Lac-Chr6:306800 3.50E-48 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g0985 K18810 - csv:101216206 587.8