Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g1029 ATGGCCGTCGCCGTGCCGGATAATCTCTCTCGTGAGCAATATGTGTACCTTGCGAAGCTTGCCGAGCAGGCTGAAAGATACGAGGAGATGGTTCAGTTCATGCAGAAACTTGTTCTTGGTTCAACCCCAGGCTCCGAGCTCTCTGTCGAGGAACGAAATCTTCTCTCTGTCGCTTACAAGAACGTGATTGGCTCACTTCGAGCCGCTTGGCGGATTGTCTCTTCCATCGAGCAGAAGGAGGAGAGCCGTAAGAATGAAGAGCATGTTGTTCTTGTTAAGGATTATAGATCAAAGGTTGAGTCTGAGCTTTCCGAAGTCTGTGCGAGTATTTTGCAGCTTTTGGACTCGAATCTCATTCCCTCAGCCTCTGCTAGTGAGTCTAAGGTCTTCTACTTGAAGATGAAGGGGGATTACCATAGGTATTTGGCGGAGTTTAAGGTTGGGGATGAGAGGAAAGCTGCTGCTGAGGATACTATGCTGGCTTATAGGGCTGCTCAGGATGTTGCTGCTGCGGATCTTGCACCCACTCATCCGATAAGGCTGGGCCTGGCACTCAATTTCTCTGTGTTTTACTTCGAGATTCTGAATCAGTCCGATAAAGCATGTAGCATGGCCAAGGAGGCATTTGAGGAAGCCATTGCTGAGCTGGACACCTTGGGTGAAGAATCATACAAGGACAGTACCCTCATCATGCAACTGTTGAGGGACAACCTCACTCTCTGGACTTCAGATGCGCAGGACCAGTTAGATGAGTCATAG 759 49.14 MAVAVPDNLSREQYVYLAKLAEQAERYEEMVQFMQKLVLGSTPGSELSVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVVLVKDYRSKVESELSEVCASILQLLDSNLIPSASASESKVFYLKMKGDYHRYLAEFKVGDERKAAAEDTMLAYRAAQDVAAADLAPTHPIRLGLALNFSVFYFEILNQSDKACSMAKEAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQDQLDES 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9402343 9404664 + Lag0004998.1 Lac6g1029 610798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g1029 252 PRINTS 14-3-3 protein zeta signature 126 148 IPR000308 -
Lac6g1029 252 PRINTS 14-3-3 protein zeta signature 161 187 IPR000308 -
Lac6g1029 252 PRINTS 14-3-3 protein zeta signature 46 75 IPR000308 -
Lac6g1029 252 PRINTS 14-3-3 protein zeta signature 188 214 IPR000308 -
Lac6g1029 252 PRINTS 14-3-3 protein zeta signature 215 244 IPR000308 -
Lac6g1029 252 PRINTS 14-3-3 protein zeta signature 95 119 IPR000308 -
Lac6g1029 252 PIRSF 14-3-3 7 252 IPR000308 -
Lac6g1029 252 ProSitePatterns 14-3-3 proteins signature 1. 52 62 IPR023409 -
Lac6g1029 252 ProSitePatterns 14-3-3 proteins signature 2. 224 243 IPR023409 -
Lac6g1029 252 PANTHER 14-3-3 PROTEIN 11 247 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Lac6g1029 252 FunFam 14-3-3 protein epsilon 8 252 - -
Lac6g1029 252 Gene3D - 2 252 IPR036815 -
Lac6g1029 252 SMART 1433_4 11 251 IPR023410 -
Lac6g1029 252 SUPERFAMILY 14-3-3 protein 10 244 IPR036815 -
Lac6g1029 252 Coils Coil 17 37 - -
Lac6g1029 252 Pfam 14-3-3 protein 17 242 IPR023410 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac4g0500 Lac-Chr4:11554483 Lac6g1029 Lac-Chr6:9402343 1.40E-99 dispersed
Lac6g1029 Lac-Chr6:9402343 Lac6g0913 Lac-Chr6:8083447 5.20E-99 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g1029 K06630 - csv:101222827 468.774