Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g1046 ATGGTGATGCCCGAGTCTTCTGAGGGCCACCGGACCGCGTCTCGTCGGCCGAATCGACCGCTTGTCGGAGCTAGGGTTCCGCTAAAACGGTTACTCCGCGTCGCATCTGTCGCATGTGGAATTCAATTCGGTTGGGCTTTGCAGCTCTCTCTTCTTACTCCTTATATTCAAGAGCTCGGTATTCCTCATGCTTGGTCTAGTCTCATATGGCTCTGCGGACCGCTTTCCGGCCTCTTTGTGCAGCCGCTCGTTGGCCACATGAGCGATCGCTGCACCAGCCGATACGGCCGCCGCAGGCCGTTCATCGTCGCTGGAGCGCTTTCCATAGTGCTCGCCGTTTTGATTATCGGTCACTCGGCAGACCTCGGTTGGTTGATTGGTGACAGAGGTGATGTTAGGCCTCGTGCGATTGGATTCTTTGTGTTTGGATTTTGGATTCTGGACGTCGCTAACAACTTCTCACAGGGTCCTTGTAGAGCTCTGCTCGCTGATCTTACCGGTAAGGATCATCGAAGGAATCGAGTGGCAAATGCTTATTTTTCTCTATTTATCGCTATTGGTAATGTTTTTGGATATGCGACTGGATCTTTTAGTGGCTGGTACAAGATCTTGCCGTTTACTCGTACCTCTGCATGTTCTGTGAATTGTGCAAATCTCAAGTCAGCTTTCTTGATTGATATCGTGTTCATTGCAATTACAACATATTTGAGTGTCTCAGCAGCTCAAGAGTTACCTCTAGATTCAAACGACAGGTTGTCCCTGGTTGTGGAAGAAGGTATGGGGCAGTCAAGTCATGCTTCAGAAGCATTCCTCTGGGAGTTGTTTCGGACTTTTAGAAATTTCTCCGGGTATATGTGGGTAATTTTGCTTGTCACTTCCCTGACATGGGTAGCATGGTTTCCATTTATTCTATTTGATACTGATTGGATGGGTAGAGAGATTTATGGTGGGAAGCCGAACGAAGGACAGAGCTATAGTTCTGGAGTCAGAATGGGAGCATTTGGTCTGATGTTTAATTCTGTTGTCCTTGGAATAACTTCATTACTTATGGAGAAGCTGTGCAGAAAGTGGGGTGCTGGTTTTGTATGGGGAATCTCTAATATTTTTATGGCTCTATGTTTCCTTACTATCCTGGTTGTCACGTATGTGGCAAACAATATGGGCTATATAGGTCATGATCTCCCACCAAATAGTATTGTATCAGCTGCATTGATTATCTTTGCTCTTCTTGGCGCCCCTTTGGCAATTACTTACAGTGTTCCATATGCCATGATCTCCTCGCGTGTTGAATCTTTACAACTTGGTCAAGGTTTGTCTGCGGGTGTCTTGAACTTAGCAATAGTAATCCCACAGGAGTTATTTGCTGGTCGTTGA 1374 46.58 MVMPESSEGHRTASRRPNRPLVGARVPLKRLLRVASVACGIQFGWALQLSLLTPYIQELGIPHAWSSLIWLCGPLSGLFVQPLVGHMSDRCTSRYGRRRPFIVAGALSIVLAVLIIGHSADLGWLIGDRGDVRPRAIGFFVFGFWILDVANNFSQGPCRALLADLTGKDHRRNRVANAYFSLFIAIGNVFGYATGSFSGWYKILPFTRTSACSVNCANLKSAFLIDIVFIAITTYLSVSAAQELPLDSNDRLSLVVEEGMGQSSHASEAFLWELFRTFRNFSGYMWVILLVTSLTWVAWFPFILFDTDWMGREIYGGKPNEGQSYSSGVRMGAFGLMFNSVVLGITSLLMEKLCRKWGAGFVWGISNIFMALCFLTILVVTYVANNMGYIGHDLPPNSIVSAALIIFALLGAPLAITYSVPYAMISSRVESLQLGQGLSAGVLNLAIVIPQELFAGR 457
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9589523 9592391 - Lag0005015.1 Lac6g1046 610815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g1046 457 PANTHER SUGAR TRANSPORTER 25 455 - GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0008506(PANTHER)|GO:0016020(PANTHER)
Lac6g1046 457 NCBIfam sucrose/proton symporter 26 453 IPR005989 GO:0005886(InterPro)|GO:0008515(InterPro)|GO:0015770(InterPro)
Lac6g1046 457 Pfam MFS/sugar transport protein 43 177 - -
Lac6g1046 457 SUPERFAMILY MFS general substrate transporter 31 440 IPR036259 -
Lac6g1046 457 CDD MFS_SLC45_SUC 31 451 - -
Lac6g1046 457 Gene3D MFS general substrate transporter like domains 28 450 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac6g1046 Lac-Chr6:9589523 Lac6g1578 Lac-Chr6:21512156 3.30E-120 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g1046 K15378 - csv:101220384 843.958