Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g1238 ATGATATTTATATGTCTGTTCGGTAAGGCGACTAGTTCAAAAAACTCCGGCTCCTTCCCGCTCCTTCTCCCCGCTCCTCTCCCCTTGACGCTCCTCCGCCATGTTCCTCCGCCTCTAGCTCCGTCGCCTATGGCTGCTGTCTCACTCCATCTCTATGCACTCGAAGTTATGGCCGACCTGCTGATCGGAGAAGATCTTCGAATGGAACTCCCTGTGATGCTTGTGAATTTTCCTAGAAATGCTGCAATTAGCTTTGACGGATTTTTTGTGCATTTGTTACTCCTTGCTGCCATTATTCTATTGCTGAAAGAAAGAAATTCAGGTGCTGAGGGTAGCTCTAATGCAAATGGAACCGAAGTTGTTGGAAGTTATAGCCATGCATTTGCTCGTCCACACACAACGGATCTGTCGAATATGATGAAAGAACTTAAGTTTGCTGTCAGAATTACACGCTCCCAGTCTAATTCCTCAAGTAGACTGGGAGCTATTTCACCCTCGTTAGAACTTTCACTCAAAGAACTGCGCAAACGTGGTCACGCCGCAAACTCTGAACGAGCACAACTAGATGGAAGTAATGCTCCTGCAACTATCACTGTTGGCATTCGGGGCAAAAGGAGAGCAGTGCTCAAGGATGTTACTAACATGTCCTATGAGAGCAATAATCTGGGCTGCTTGCGTGCTTCTAAAATACAGGTGCAAGAGGTTGCACAGAACGAATCACTTGAAGATTCATCTATTAAAAGGACGGCAGCAGAATCACAAGGTACCTCTCCAACGGTGAAATCAGACAAAAAAGAGATAGCACAGGAGAACAGGTTTCAGAGTGTCAAAGGATGCACAAATTTTGCGTTCCCCATGCCTTTGGGATCAAAAGACCACCAAATGAAAGATGAGGCTACAGTTTGTGAGAAATTAAACCATCTCGGTTCTTTGGATGCTGTTTCAAACTCAGAAGATTCTCAAGCATGCACCCTATATGCCCATAATATGTATGATACTAATCGTGTAATAGAGCTTGATCAAAGGCCTTCTGCTAATTATATGGAAAAGTTACAGAAATATATCTCTCCAATCATGCGAGGGATTCTAATTGATTGGCTAGTGGAGGTTTCTGAAGAATATAAACTGGTCTCAGACACACTTTACCTCACCGTGAATCTCATTGATCGGTTTCTCTCTCAAAGTTACATTGAAAGACACAGATTACAACTCCTTGGTGTTACTTGCATGTTAATTGCCTCTAAATATGAAGAAGTCTGTGCACCATTTGTGGAAGAGTTTTGCTTCATCACAGACAACACCTATACGAGAGGAGAGGTACTAAAAATGGAGGGTGAAGTACTGAACTTGCTCAACTTTCAGCTCTCTGTTCCCACTACAAAAACATTTCTCAGGAGATTTGTGCAGGTAGCACAGGCTTCTTGCAAGGAGCCTTGCGACGAGTTCAAGCATTTGACAGATTATCTAGCAGAGTTGACTCTTGGTGAGTACAGCTTCCTCAGGTTTCTGCCTTCAGCAGTAGCTGCCTCCGTGGTGTTCTTAGCCAAATGGATTCTGAATCAACCAAATCTCCCATGGAATCCAGCTCTCGAACATTATACCAATTACAGTGTCTCCGAGCTAAAAACTCCAGTACTTGCCTTAGAAGATCTCAGATTGAACTCTACAGGTTGCCCTTTAAACGCCGTATTCCAGAAGTATAGACAACAGAAGTTTGGAAGTGTGGCGACTTTAACCTCCAGAAAACCAGTTCTCTCAGCTTTCCAAAACCAGAGAGATACCTGA 1785 43.75 MIFICLFGKATSSKNSGSFPLLLPAPLPLTLLRHVPPPLAPSPMAAVSLHLYALEVMADLLIGEDLRMELPVMLVNFPRNAAISFDGFFVHLLLLAAIILLLKERNSGAEGSSNANGTEVVGSYSHAFARPHTTDLSNMMKELKFAVRITRSQSNSSSRLGAISPSLELSLKELRKRGHAANSERAQLDGSNAPATITVGIRGKRRAVLKDVTNMSYESNNLGCLRASKIQVQEVAQNESLEDSSIKRTAAESQGTSPTVKSDKKEIAQENRFQSVKGCTNFAFPMPLGSKDHQMKDEATVCEKLNHLGSLDAVSNSEDSQACTLYAHNMYDTNRVIELDQRPSANYMEKLQKYISPIMRGILIDWLVEVSEEYKLVSDTLYLTVNLIDRFLSQSYIERHRLQLLGVTCMLIASKYEEVCAPFVEEFCFITDNTYTRGEVLKMEGEVLNLLNFQLSVPTTKTFLRRFVQVAQASCKEPCDEFKHLTDYLAELTLGEYSFLRFLPSAVAASVVFLAKWILNQPNLPWNPALEHYTNYSVSELKTPVLALEDLRLNSTGCPLNAVFQKYRQQKFGSVATLTSRKPVLSAFQNQRDT 594
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 12008772 12016228 - Lag0005207.1 Lac6g1238 611007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g1238 594 Gene3D - 331 577 - -
Lac6g1238 594 Pfam Cyclin, C-terminal domain 458 579 IPR004367 -
Lac6g1238 594 SUPERFAMILY Cyclin-like 457 580 IPR036915 -
Lac6g1238 594 PANTHER CYCLINS 312 568 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Lac6g1238 594 SUPERFAMILY Cyclin-like 319 455 IPR036915 -
Lac6g1238 594 SMART cyclin_7 365 449 IPR013763 -
Lac6g1238 594 SMART cyclin_7 462 550 IPR013763 -
Lac6g1238 594 FunFam Mitotic cyclin 6 343 443 - -
Lac6g1238 594 Gene3D - 343 456 - -
Lac6g1238 594 SMART Cyclin_C_2 458 581 IPR004367 -
Lac6g1238 594 MobiDBLite consensus disorder prediction 237 265 - -
Lac6g1238 594 ProSitePatterns Cyclins signature. 360 391 IPR048258 -
Lac6g1238 594 Pfam Cyclin, N-terminal domain 330 456 IPR006671 -
Lac6g1238 594 FunFam Cyclin A1 446 577 - -
Lac6g1238 594 MobiDBLite consensus disorder prediction 237 262 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac4g2834 Lac-Chr4:46964845 Lac6g1238 Lac-Chr6:12008772 2.20E-94 dispersed
Lac6g1238 Lac-Chr6:12008772 Lac8g1821 Lac-Chr8:36495788 2.70E-69 dispersed
Lac2g0633 Lac-Chr2:4734814 Lac6g1238 Lac-Chr6:12008772 5.00E-107 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g1238 K06627 - csv:101211578 734.947