Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g1291 ATGAAGACTGGATCGCCACTTGTTTCCGAATATGGATTGTTCATTTTTATCACCGCGCTTCTGTTACTTGAGACTTCGACAGTGGCAGACCCCAGATCCCGAACGGTGAAGATTCTCTGTTCGACTGTGGTAGAGCATAATACAACGGCTTTCGTCCCGAATTTCGTCGGCACAATGCAAATCATCAGTGACCAAATGCGAACCGGTGGTTTTGGAGTGGCAGTTGCCGGGAAAGGGCCCGACGCCAACTACGGCCTCGCTCAGTGCTACGGAGATTTGTCGCTCATGGATTGTGTCTTGTGTTATGCGGAAGCCCGTACTGTCCTTCCTCAGTGCTTCCCTTTCAACGGCGGCCGAATTTTCCTCGATGGCTGCTTCATGAGGGCCGAAAACTACAGCTTCTATGACGAATTCAAGGGGCCTCTGGACAGGGCTGTCTGCGGCAACACTTCCATTAGCAACTCCATTTTCGGACAGTCGGCCAGGCAGGCTGTGGCCCGAGCGATTGACACTGCACCCAACAATGGAGGCTATGCGAGAGTTCAAGTGGCTCTCCCTGAAACCCCCAATGCCTCGGTTTACCTGTTGGCTCAGTGCTGGAGGAATTTGAATCGCAGCTCCTGCACTTCCTGTTTGCAAAACGCCTCTGCTTCTATCTTGAAATGCTTGCCTCGATCTGAAGCAAGAGCCCTCAACACAGGTTGCTTCATGAGATACTCAAACGTTGACTTTCTAAATGCGGAACCTCGAGCTGCAAGGTCAAGAGGTACTATCATAGAAATTGTAGTGTCACTGGTGAGCTCTGTTGCCGTTTTGGTCGTTGGAGTGTTGATTGGAATCTACATCTGGAATAACAGATATATAAATAAGAAACGAAGAGGTTCAAATGATGCAAACAAGATGGCCAAATCACTAAATAATAGTAGCTTGAATTTCAAGTACTCTACTCTTGAAAAGGCAACGGGATCTTTTGCTGAGGCTAACAAGCTTGGACAAGGAGGATTTGGCACTGTTTATAAGGGAGTTCTGTCGGACGGAAGAGAGATAGCTGTGAAGAGGCTTTTCTTCAATAACAAACATAGAGCAGCAGACTTTTACAATGAAGTAAACATAATTAGCAGTGTGGAGCACAAAAATTTAGTAAGGTTACTTGGTTGTAGTTGTTCTGGACCTGAAAGTCTGCTCGTCTATGAATTCCTTCCCAACAAGAGTCTTGACCGCTTCATTTTTGATCGAGATAGAGGCAGATCCCTCAATTGGGAGAAGAGATTTGATATTATAGTGGGAACAGTTGAAGGTTTGGTTTACTTGCATGAGAACTCGAAAACCAAGATCATTCACAGAGACATCAAGGCCAGTAACATCCTGCTGGACTCAAAGCTTCGAGCTAAAATTGCTGATTTTGGATTAGCTAGATCCTTCGAAGAAGACGTGAGCCACATCAGCACTGCCATTGCCGGAACCTTGGGATATATGGCGCCAGAGTACTTAGCTCACGGCCAACTAACAGAAAAGGCAGATGTCTACAGTTTTGGTGTGGTTTTGCTGGAAACCATCACTGGGATACAAAACAGCAGGAGCAAAACCTCGGACTACTTGGAAAGCATAGTACTAATTACATGGAAGCACTTTCAAGCGGGAACAGTGGAAAGGATATACGATCCGAAGCTGATGGTGGATGAGAAGGAGGAGGATGGGAGCATGAAAGAGGAGATACTGAGAGTGGTGCACATAGGGCTTCTGTGTACACAGGAGAGTGCATCACTGCGACCCACAATGTCAAAGGTTCTACAGATGCTGATGAAGAAGGAAGAGAGACTTCCAGCGCCGACCAACCCACCATTCATGGACGAGAGGACAATGGAACTCAACGACACGAGCGAGGACCCATCATACTTCAACGTCACAGAAGGTTCTTCCTCAGCTGCCACCGTCACCCATAGTTCATTCCATCCAAGGTAA 1962 47.09 MKTGSPLVSEYGLFIFITALLLLETSTVADPRSRTVKILCSTVVEHNTTAFVPNFVGTMQIISDQMRTGGFGVAVAGKGPDANYGLAQCYGDLSLMDCVLCYAEARTVLPQCFPFNGGRIFLDGCFMRAENYSFYDEFKGPLDRAVCGNTSISNSIFGQSARQAVARAIDTAPNNGGYARVQVALPETPNASVYLLAQCWRNLNRSSCTSCLQNASASILKCLPRSEARALNTGCFMRYSNVDFLNAEPRAARSRGTIIEIVVSLVSSVAVLVVGVLIGIYIWNNRYINKKRRGSNDANKMAKSLNNSSLNFKYSTLEKATGSFAEANKLGQGGFGTVYKGVLSDGREIAVKRLFFNNKHRAADFYNEVNIISSVEHKNLVRLLGCSCSGPESLLVYEFLPNKSLDRFIFDRDRGRSLNWEKRFDIIVGTVEGLVYLHENSKTKIIHRDIKASNILLDSKLRAKIADFGLARSFEEDVSHISTAIAGTLGYMAPEYLAHGQLTEKADVYSFGVVLLETITGIQNSRSKTSDYLESIVLITWKHFQAGTVERIYDPKLMVDEKEEDGSMKEEILRVVHIGLLCTQESASLRPTMSKVLQMLMKKEERLPAPTNPPFMDERTMELNDTSEDPSYFNVTEGSSSAATVTHSSFHPR 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 12958609 12961247 + Lag0005260.1 Lac6g1291 611060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g1291 653 SMART serkin_6 324 616 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac6g1291 653 ProSiteProfiles Gnk2-homologous domain profile. 139 244 IPR002902 -
Lac6g1291 653 FunFam Cysteine-rich receptor-like protein kinase 2 400 608 - -
Lac6g1291 653 Gene3D Phosphorylase Kinase; domain 1 285 399 - -
Lac6g1291 653 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 176 630 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Lac6g1291 653 FunFam Cysteine-rich receptor-like protein kinase 3 143 244 - -
Lac6g1291 653 FunFam Putative DUF26-domain receptor-like protein kinase family protein 293 399 - -
Lac6g1291 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac6g1291 653 MobiDBLite consensus disorder prediction 607 653 - -
Lac6g1291 653 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524(InterPro)
Lac6g1291 653 Gene3D - 144 244 IPR038408 -
Lac6g1291 653 Gene3D - 33 134 IPR038408 -
Lac6g1291 653 ProSiteProfiles Gnk2-homologous domain profile. 33 134 IPR002902 -
Lac6g1291 653 Gene3D Transferase(Phosphotransferase) domain 1 400 611 - -
Lac6g1291 653 SUPERFAMILY Protein kinase-like (PK-like) 308 631 IPR011009 -
Lac6g1291 653 CDD STKc_IRAK 330 602 - -
Lac6g1291 653 Pfam Salt stress response/antifungal 147 241 IPR002902 -
Lac6g1291 653 Pfam Salt stress response/antifungal 47 132 IPR002902 -
Lac6g1291 653 FunFam Cysteine-rich receptor-like protein kinase 2 33 134 - -
Lac6g1291 653 ProSiteProfiles Protein kinase domain profile. 324 616 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac6g1291 653 Pfam Protein kinase domain 326 598 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac6g1291 653 MobiDBLite consensus disorder prediction 626 653 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g3114 Lac-Chr10:45520224 Lac6g1291 Lac-Chr6:12958609 2.30E-06 dispersed
Lac6g1291 Lac-Chr6:12958609 Lac8g0254 Lac-Chr8:2842891 7.70E-110 dispersed
Lac5g2500 Lac-Chr5:43542531 Lac6g1291 Lac-Chr6:12958609 3.60E-66 transposed
Lac13g0181 Lac-Chr13:1270615 Lac6g1291 Lac-Chr6:12958609 2.40E-132 wgd
Lac6g1291 Lac-Chr6:12958609 Lac6g1293 Lac-Chr6:12965366 9.30E-249 wgd
Lac6g1291 Lac-Chr6:12958609 Lac9g0835 Lac-Chr9:17529861 2.30E-28 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86267 PF00069 Pkinase 2.30E-46 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g1291 - - - 0.0