Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g1299 ATGTACGGCCTGCGCTCCACTCCGGATTTCTCGCCTAAGTCCTTCCTTCCACCGGAGAACCTCATCCTTCCCGTTGATTACCAGACCTTGCTTTCCTCCACCGGCTTTCGCGATCGGATTCCTATCTTCGGATCCGATGAATTACTTTCCGCTGCTGCTTCCGCCATATCCGAAGCTGAAGCACCTTCCATCACTCCAGATTTTTCGCTCGGAGAAGACGTTCTCACCGTCATCAAGGCCAAAATTGTCTCTCATCCAACCTATCCTCGCTTGCTCCAAGCTTATATCGACTGCCAGAAGGTTGGAGCTCCTCCGGAGATAGCGAGCTTGTTGGAGGGAATCCGGCGAGAAAACGACAGTCATAAACAAAACGCCATTTCCACGTGCTTTGGAGCCGATCCCGAGCTCGACGAGTTCATGGAATCGTACTGTGACATGTTGGTCAAGTATAAATCAGATCTCTCAAGGCCTTTTCATGAAGCTTCCTCCTTCTTGAATAACATCCAACTGCAACTTAGCAACCTCTGTGCTGGTGCCTCCACCAGAAGCCTTTCCAGTCAGTCTCTCTCCCTTTCCTTTTCTTTCTATTATTACTTGTTTTCGCACTCTATTTTCTTCTTCTTATTCGCTTCTGCGTACATTGTTTTGCTTGTATCTGAATCTGAAATGCTTCTTTCTTGA 681 47.87 MYGLRSTPDFSPKSFLPPENLILPVDYQTLLSSTGFRDRIPIFGSDELLSAAASAISEAEAPSITPDFSLGEDVLTVIKAKIVSHPTYPRLLQAYIDCQKVGAPPEIASLLEGIRRENDSHKQNAISTCFGADPELDEFMESYCDMLVKYKSDLSRPFHEASSFLNNIQLQLSNLCAGASTRSLSSQSLSLSFSFYYYLFSHSIFFFLFASAYIVLLVSESEMLLS 226
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 13067718 13069033 - Lag0005268.1 Lac6g1299 611068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g1299 226 PANTHER FUSED COMPOUND LEAF 1 72 184 - -
Lac6g1299 226 Pfam KNOX1 domain 78 119 IPR005540 GO:0003677(InterPro)|GO:0005634(InterPro)
Lac6g1299 226 SMART KNOX2_2 126 177 IPR005541 GO:0003677(InterPro)|GO:0005634(InterPro)
Lac6g1299 226 SMART KNOX1_2 76 120 IPR005540 GO:0003677(InterPro)|GO:0005634(InterPro)
Lac6g1299 226 Pfam KNOX2 domain 130 176 IPR005541 GO:0003677(InterPro)|GO:0005634(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g0716 Lac-Chr3:5654134 Lac6g1299 Lac-Chr6:13067718 5.50E-39 dispersed
Lac6g1299 Lac-Chr6:13067718 Lac6g2534 Lac-Chr6:43116099 7.10E-31 dispersed
Lac13g0183 Lac-Chr13:1279830 Lac6g1299 Lac-Chr6:13067718 5.20E-70 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g1299 - - - 0.0