Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g1476 ATGGCGGGGAAGCCCAACTCGGTTTCCTTCAGGGTTCCCTACAGGAACCTCCACGATGCAGAAGTGGAGATGGTCGCTGTCGACGAGCAGCAGCTCCAAGGGATCGATCTCAATTCTCCTTCTTCTGATAGATTTCCCAATGGAACCCCAGACAGTTCGTCATCAACGCCTCATGTTAGATCTACGCCCAACAGTCTGATTATCTTGATTCTCAGTTGTACTATTGCGGCCGGTGTTCAATTTGGTTGGGCATTACAGCTTTCCCTACTGACTCCTTATATTCAGACACTTGGAATTGAGCATGCATTTTCTTCGTTTATTTGGCTTTGCGGTCCCATCACTGGTCTCGTGGTTCAACCATGTGTTGGTATATGGAGTGATAAGTGTTCTTCAAAATATGGAAGGAGGCGTCCCTTTATTCTTGCTGGGTCTTTAATGATAGCAGTTGCTGTGGTGTTGATTGGATTTTCTGCTGACATTGGATATATACTAGGAGATACGAAGGAACATTGCAGAGTATATAAGGGAACACGAACAAGGGCAGCTATTATCTTTGTAATAGGCTTTTGGATGCTTGATCTTGCAAACAATACGGTGCAGGGTCCTGCTCGTGCTCTTCTAGCTGATTTATCAGGTCCTGATCAACACAATGTTGCAAATGCGGTATTTTGTTCATGGATGGCAGTTGGTAATATCCTAGGTTTTTCAGCAGGAGCTAGTGGAAATTGGCACAAATGGTTTCCTTTCCTTTTGAGCGATGCTTGCTGTGAAGCCTGTGGAAACCTTAAAGCAGCATTTCTTGTTGCTGTGCTTTTTCTAACCATATGTACTCTTGTTACCATATATTTTGCCGATGAAGTTCCCCTTACTGCTGTAGATCAACCACCACGTTTATCAGATTCTGCTCCTTTGTTGAATGGGAATGAACAAAAAAATCTGGTAGTCAAATTGTTGACCAGTTTAAGACATTTACCACCGGCCATGCATTCAGTGCTTCTTGTGATGGCTCTTAGCTGGTTATCCTGGTTTCCCTTCTTCTTATTCGATACAGATTGGATGGGAAGGGAAGTGTATCATGGGGACCCAAAAGGCAGTTTGACTGAAGAACAGGTTTATGATCAGGGTGTCAGAGAAGGTGCATTTGGTTTGCTATTGAATTCTGTTGTTCTTGGTATCAGTTCTTTCTTTATAGAGCCAATGTGTCAGCGCATGGGAGCAAGACTTGTCTGGGCAATGAGCAACTTTATTGTGTTTGCATGCATGATGGGAACTACTGTTATCAGTTTAATATCCGTCAGTCAATACTCTGAAGGAATTGAACATATTATTGGGGGAAATTCAACAATAAAAAATGCTGCATTGGTTGTTTTTGCTCTTCTTGGTTTTCCTCTTGCTATAACATATAGCGTTCCCTTCTCTTTGACAGCAGAATTGACTGCTGATTCTGGTGGTGGGCAAGGATTGGCTATAGGAGTTCTCAATCTTGCAGTTGTTATTCCCCAGATGATTGTATCCTTGGGTGCTGGGCCATGGGATGCTTTATTCAGTGGAGGAAACATTCCTGCATTTGCTTTGGCTTCTGTATGTGCGCTTGCGGCTGGAGTTGTTGCGGTTCTTAGACTGCCTAATCACACCAACAGCTCTTTCAAATCCACAGGTATGCTTTGGCTTTGGAGAATTCATTGTCCCTATTATTGTACTTTTGCTCCCTTTGATTTCCAAAGCCATTTAAGATTTGTCAGTGCTCTAGGGTTGAACCCTAATTGGTTGGCAAATGGCAAACATAGCAGTTGTCAACAAAGAGAATGGAAGATGGTATCATACTAA 1827 42.97 MAGKPNSVSFRVPYRNLHDAEVEMVAVDEQQLQGIDLNSPSSDRFPNGTPDSSSSTPHVRSTPNSLIILILSCTIAAGVQFGWALQLSLLTPYIQTLGIEHAFSSFIWLCGPITGLVVQPCVGIWSDKCSSKYGRRRPFILAGSLMIAVAVVLIGFSADIGYILGDTKEHCRVYKGTRTRAAIIFVIGFWMLDLANNTVQGPARALLADLSGPDQHNVANAVFCSWMAVGNILGFSAGASGNWHKWFPFLLSDACCEACGNLKAAFLVAVLFLTICTLVTIYFADEVPLTAVDQPPRLSDSAPLLNGNEQKNLVVKLLTSLRHLPPAMHSVLLVMALSWLSWFPFFLFDTDWMGREVYHGDPKGSLTEEQVYDQGVREGAFGLLLNSVVLGISSFFIEPMCQRMGARLVWAMSNFIVFACMMGTTVISLISVSQYSEGIEHIIGGNSTIKNAALVVFALLGFPLAITYSVPFSLTAELTADSGGGQGLAIGVLNLAVVIPQMIVSLGAGPWDALFSGGNIPAFALASVCALAAGVVAVLRLPNHTNSSFKSTGMLWLWRIHCPYYCTFAPFDFQSHLRFVSALGLNPNWLANGKHSSCQQREWKMVSY 608
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 17833439 17840628 - Lag0005445.1 Lac6g1476 611245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g1476 608 SUPERFAMILY MFS general substrate transporter 68 545 IPR036259 -
Lac6g1476 608 NCBIfam sucrose/proton symporter 67 544 IPR005989 GO:0005886(InterPro)|GO:0008515(InterPro)|GO:0015770(InterPro)
Lac6g1476 608 CDD MFS_SLC45_SUC 69 539 - -
Lac6g1476 608 PANTHER SUGAR TRANSPORTER 65 539 - GO:0008506(PANTHER)|GO:0016020(PANTHER)
Lac6g1476 608 MobiDBLite consensus disorder prediction 37 60 - -
Lac6g1476 608 FunFam Sucrose transport protein SUC3 65 540 - -
Lac6g1476 608 Gene3D MFS general substrate transporter like domains 62 541 IPR036259 -
Lac6g1476 608 Pfam Major Facilitator Superfamily 76 430 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac6g1476 Lac-Chr6:17833439 Lac6g1578 Lac-Chr6:21512156 3.80E-119 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g1476 K15378 - csv:101205348 989.178