Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g1554 ATGGCAAGCTTGGTATCGTGTAATTCAGATGGATGGTGCAGTTTAAAAAGTTTGCTGTTGGGCACCGGAGGGTGCTTGGTTTGGACATGGATCATTGTCCATAGATGGAACCAAAGAAACAAGACAGGTCCCAAAACATGGCCACTCGTAGGAGCAGCAATCGAACAGTTCCTAAACTACCACAGAATGCACGATTGGCTTCTCGGTTACCTCAATCTCTCCAAAACTGTTGTTGTCCCTATGCCTTTCACTACTTATACTTACATTGCTGACCCTGCTAATGTTCAGCACATTCTCAAGACCAACTTTGTTAATTATCCCAAGGGTGATTCATATCATTCCTACATGGAAGTGCTTCTTGGCGATGGGATCTTCAACGTAGATGGAGAGCTGTGGAGGAAACAGAGGAAAACTGCGAGCTTTGAATTTGCGTCAAAAAATTTGAGGGATTTCAGTGCCCTAGTTTTTAGAGAATACAGTCTCAAGCTCTCAGCTATTTTAACTCGGGCGACTTTAGAAAAACAACAAGTTGACATGCAGGAACTGTTGATGAGAATGACTTTGGACTCCATATGCAAGGTGGGATTTGGTGTTGAAATTGGATCCTTAGCTCCAAATTTGCCAGAAAATCGCTTCGCTAAGGCTTTTGACACAGCAAACATCATCGTCACCCTTCGCTTCATTGATCCTTTGTGGAAAATTAAAAGATTTTTTAATTTGGGATCTGAAGCTCTCCTCGACAAGTCCATCAAAATCATCGATGACTTCACCTACTCTGTAATTGCCACAAGGAAAAAAGAGATAGATGAAGCTCGAACCACAGGCAAAGGTGGCAATAAGGTAATTTAA 849 42.17 MASLVSCNSDGWCSLKSLLLGTGGCLVWTWIIVHRWNQRNKTGPKTWPLVGAAIEQFLNYHRMHDWLLGYLNLSKTVVVPMPFTTYTYIADPANVQHILKTNFVNYPKGDSYHSYMEVLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSALVFREYSLKLSAILTRATLEKQQVDMQELLMRMTLDSICKVGFGVEIGSLAPNLPENRFAKAFDTANIIVTLRFIDPLWKIKRFFNLGSEALLDKSIKIIDDFTYSVIATRKKEIDEARTTGKGGNKVI 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 20479972 20482669 + Lag0005523.1 Lac6g1554 611323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g1554 282 Gene3D Cytochrome P450 34 279 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac6g1554 282 SUPERFAMILY Cytochrome P450 33 271 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac6g1554 282 Pfam Cytochrome P450 43 271 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac6g1554 282 PANTHER CYTOCHROME P450 29 268 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac6g1554 Lac-Chr6:20479972 Lac7g0297 Lac-Chr7:2277074 6.30E-53 dispersed
Lac10g1894 Lac-Chr10:24549545 Lac6g1554 Lac-Chr6:20479972 2.10E-30 wgd
Lac10g2281 Lac-Chr10:34859605 Lac6g1554 Lac-Chr6:20479972 2.30E-29 wgd
Lac5g1251 Lac-Chr5:23607840 Lac6g1554 Lac-Chr6:20479972 1.10E-61 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g1554 K20495 - csv:101222076 453.366