Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g1555 ATGAGATGGCAGATAAAACATGACATATTATCAAGATTCATTGAGTTAGGCGAAGATCCAAGCAACAATTTCACAAACAAAAGCTTGAGAGATGTGGTTCTCAACTTTGTGATTGCTGGACGTGACACAACAGCAGCCACTCTTTCATGGGCTATTTATATGGTAATGACTCATTCTCATGTAGCTGACAAACTTTACTCAGAGCTCAAGAGTTTCGAAGAAGAACGAGCCAAAGAAGAGAGAATTTCATTGCTTCAGCACCATCCAACTGATCTTCAATCCTTCGAGAGAAGAGTAATGCAGTTTGCACAACTCCTCAATTACGATTCCCTCTCCAGATTACATTATTTGCATGCTATGATCACTGAGACACTTCGTCTTTACCCTGCAGTCCCCCAGGACCCAAAGGGAGTTTTGGAGGATGATGTTTTACCAGATGGAACAAAGGTAAAAGCAGGAGGAATGGTGACGTATGTTCCTTACTCAATGGGAAGAATGGAATACAATTGGGGCTCTGATGCAACTTGTTTTAACCCTGAAAGATGGCTCAAACAAGGCCTTTTCCACTCCGAATCTCCATTCAAGTTCACAGCTTTTCAGGCTGGACCAAGGATCTGCATGGGGAAAGACTCGGCATATCTGCAAATGAAGATGGCTCTTGCCATTTTGTGCAGATTCTACAAATTTAGTTTGGTCACTGGCCATCAAGTCAACTACAGAATGATGACTATTCTCTCCATGGCCAATGGCTTGAAAGTTACCGTTGCTACACGCTCTTGA 780 42.56 MRWQIKHDILSRFIELGEDPSNNFTNKSLRDVVLNFVIAGRDTTAATLSWAIYMVMTHSHVADKLYSELKSFEEERAKEERISLLQHHPTDLQSFERRVMQFAQLLNYDSLSRLHYLHAMITETLRLYPAVPQDPKGVLEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGSDATCFNPERWLKQGLFHSESPFKFTAFQAGPRICMGKDSAYLQMKMALAILCRFYKFSLVTGHQVNYRMMTILSMANGLKVTVATRS 259
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 20484787 20485757 + Lag0005524.1 Lac6g1555 611324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g1555 259 PRINTS E-class P450 group I signature 48 74 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac6g1555 259 PRINTS E-class P450 group I signature 118 136 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac6g1555 259 PRINTS E-class P450 group I signature 196 206 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac6g1555 259 PRINTS E-class P450 group I signature 28 45 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac6g1555 259 PRINTS E-class P450 group I signature 206 229 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac6g1555 259 PANTHER CYTOCHROME P450 7 251 - -
Lac6g1555 259 Coils Coil 62 82 - -
Lac6g1555 259 Gene3D Cytochrome P450 3 258 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac6g1555 259 SUPERFAMILY Cytochrome P450 6 258 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac6g1555 259 PRINTS P450 superfamily signature 206 217 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac6g1555 259 PRINTS P450 superfamily signature 119 130 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac6g1555 259 PRINTS P450 superfamily signature 197 206 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac6g1555 259 PRINTS P450 superfamily signature 39 56 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac6g1555 259 Pfam Cytochrome P450 7 250 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac6g1555 Lac-Chr6:20484787 Lac7g0306 Lac-Chr7:2357054 1.40E-54 dispersed
Lac10g2291 Lac-Chr10:35049661 Lac6g1555 Lac-Chr6:20484787 4.60E-45 wgd
Lac6g1555 Lac-Chr6:20484787 Lac6g1606 Lac-Chr6:22570657 8.80E-17 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g1555 K20495 - csv:101222076 456.447