Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac6g2155 | ATGTTGAAGTCTAATAGAGTGTTCTTACAGAGGAGGAATTGGAAGATGGCGTCGAGTTCGTCGACTTCGCCGTGTGCAGCCTGCAAATTTCTCCGGCGAAAATGTCAACCGGAGTGCGTTTTCGCGCCGTATTTTCCGCCGGACCAGCCCCAGAAATTCGCCAATGTTCACAAGGTATTCGGCGCTAGCAATGTCACGAAACTCCTCAACGAATTGCATCCTCACCAGAGAGAAGACGCCGTCAATTCGCTCGCTTACGAAGCCGATATGCGCCTTCGCGACCCTGTCTATGGCTGCGTTGGCGTAATTTCTCTGCTCCAACACCAACTCTGTAAACTCCAAATGGATCTCACCTGCGCTAAATCCGAACTCTCCAAATACCAAAACCTAGGCATCGGGAACCACGCCGCCCTGATTTCACCGCCTTCCGCCGTTGCCGCCGTATCCGCCGCCGCTCATGGACAGCGGAACCACCAGCCGGCGTTCAATTTTGCTAGAGATCAACCGCATAACCTCCTCTATCACGATCAGTTTTTCCCTCGAGATCAACAACAGCAACCGATGATGCTCCGACGGAGCTTCGACGGCGGTAGTAACTACGACGCCGGACTTTTGGCCGTCAACGTCACCGCCAGTATCGGCAACCTCAGCCACCAGTTCCAGCAACCTCGCGCCGCCGCCGGAGACGATCGTCGCGGTACTCTCGATCATTCTTAG | 717 | 54.67 | MLKSNRVFLQRRNWKMASSSSTSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNHAALISPPSAVAAVSAAAHGQRNHQPAFNFARDQPHNLLYHDQFFPRDQQQQPMMLRRSFDGGSNYDAGLLAVNVTASIGNLSHQFQQPRAAAGDDRRGTLDHS | 238 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 37715647 | 37716363 | - | Lag0006124.1 | Lac6g2155 | 611924 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac6g2155 | 238 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 22 | 161 | - | - | |
Lac6g2155 | 238 | Pfam | Lateral organ boundaries (LOB) domain | 24 | 121 | IPR004883 | - | |
Lac6g2155 | 238 | ProSiteProfiles | LOB domain profile. | 23 | 124 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac4g2988 | Lac-Chr4:48119216 | Lac6g2155 | Lac-Chr6:37715647 | 6.30E-24 | dispersed | |
Lac6g2155 | Lac-Chr6:37715647 | Lac9g0565 | Lac-Chr9:10928658 | 2.20E-46 | dispersed | |
Lac6g2155 | Lac-Chr6:37715647 | Lac3g0157 | Lac-Chr3:1085354 | 2.40E-45 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
24052 | PF03195 | LOB | 5.10E-43 | No_clan | Lac | TF |
Pathway information
