Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g2155 ATGTTGAAGTCTAATAGAGTGTTCTTACAGAGGAGGAATTGGAAGATGGCGTCGAGTTCGTCGACTTCGCCGTGTGCAGCCTGCAAATTTCTCCGGCGAAAATGTCAACCGGAGTGCGTTTTCGCGCCGTATTTTCCGCCGGACCAGCCCCAGAAATTCGCCAATGTTCACAAGGTATTCGGCGCTAGCAATGTCACGAAACTCCTCAACGAATTGCATCCTCACCAGAGAGAAGACGCCGTCAATTCGCTCGCTTACGAAGCCGATATGCGCCTTCGCGACCCTGTCTATGGCTGCGTTGGCGTAATTTCTCTGCTCCAACACCAACTCTGTAAACTCCAAATGGATCTCACCTGCGCTAAATCCGAACTCTCCAAATACCAAAACCTAGGCATCGGGAACCACGCCGCCCTGATTTCACCGCCTTCCGCCGTTGCCGCCGTATCCGCCGCCGCTCATGGACAGCGGAACCACCAGCCGGCGTTCAATTTTGCTAGAGATCAACCGCATAACCTCCTCTATCACGATCAGTTTTTCCCTCGAGATCAACAACAGCAACCGATGATGCTCCGACGGAGCTTCGACGGCGGTAGTAACTACGACGCCGGACTTTTGGCCGTCAACGTCACCGCCAGTATCGGCAACCTCAGCCACCAGTTCCAGCAACCTCGCGCCGCCGCCGGAGACGATCGTCGCGGTACTCTCGATCATTCTTAG 717 54.67 MLKSNRVFLQRRNWKMASSSSTSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNHAALISPPSAVAAVSAAAHGQRNHQPAFNFARDQPHNLLYHDQFFPRDQQQQPMMLRRSFDGGSNYDAGLLAVNVTASIGNLSHQFQQPRAAAGDDRRGTLDHS 238
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 37715647 37716363 - Lag0006124.1 Lac6g2155 611924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g2155 238 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 22 161 - -
Lac6g2155 238 Pfam Lateral organ boundaries (LOB) domain 24 121 IPR004883 -
Lac6g2155 238 ProSiteProfiles LOB domain profile. 23 124 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac4g2988 Lac-Chr4:48119216 Lac6g2155 Lac-Chr6:37715647 6.30E-24 dispersed
Lac6g2155 Lac-Chr6:37715647 Lac9g0565 Lac-Chr9:10928658 2.20E-46 dispersed
Lac6g2155 Lac-Chr6:37715647 Lac3g0157 Lac-Chr3:1085354 2.40E-45 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
24052 PF03195 LOB 5.10E-43 No_clan Lac TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g2155 - - - 0.0