Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g2164 ATGATCCAACACAGGCCTTACACCCAAAAGGTGGACTTGTACAGCTTTGGTATTGTTCTCTGGGAGCTCATCACTGGAATGCTCCCTTTCCAGAACATGACAGCCGTTCAGGCCGCTTTTGCAGTTGTTAACAAGGGTGTCCGTCCCATCATTCCAAATGATTGCTTACCTGTTTTAAGCGACATCATGACCCGGTGCTGGGACGCCAACCCTGATGTTAGGCCATCGTTTACCGAGGTTGTCAGAATGCTCGAGAATGCACAGACGGAGATCATGACGACTGTGCGTAAGGCTCGTTTCAGGTGTTGCATTACGCAGCCGATGACAACAGACTGA 336 50.0 MIQHRPYTQKVDLYSFGIVLWELITGMLPFQNMTAVQAAFAVVNKGVRPIIPNDCLPVLSDIMTRCWDANPDVRPSFTEVVRMLENAQTEIMTTVRKARFRCCITQPMTTD 111
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 37883945 37884280 + Lag0006133.1 Lac6g2164 611933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g2164 111 ProSiteProfiles Protein kinase domain profile. 1 91 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac6g2164 111 Gene3D Transferase(Phosphotransferase) domain 1 1 107 - -
Lac6g2164 111 SUPERFAMILY Protein kinase-like (PK-like) 2 98 IPR011009 -
Lac6g2164 111 Pfam Protein tyrosine and serine/threonine kinase 2 84 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac6g2164 111 PANTHER SERINE-THREONINE PROTEIN KINASE 5 86 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac6g2164 Lac-Chr6:37883945 Lac1g3168 Lac-Chr1:51859632 1.20E-26 dispersed
Lac6g2164 Lac-Chr6:37883945 Lac10g0885 Lac-Chr10:7097697 1.10E-27 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86272 PF07714 PK_Tyr_Ser-Thr 5.90E-20 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g2164 - - - 0.0