Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g2191 ATGGCCAGAGGATCAGGAGCTCCGAAGAAAGACGAATCGGTGGCGGTGGCGGTGGACAAAGACAAATTCAGCCTGCAGGCTGTGAAATGGACGATCGAACGGCTTCTCAGCAAAGGCCAAGTTCTTACTCTGGTTCACGTCAAACAGAAATCGTCCAATTCTGCGATGAACCTCGGTGCCGATTCGGATGAGGCCGCTCTGTACAGACAGCAGCTTGAGAATCACGCCAGAGATCAGTTCTTCCTCCCGTTTCGTTGCATGTGCACAAGAACCAATGTAACATGCAATGAGGTGATATTGGAGGAGGCAGAGATTTCAAAAACATTAATCAATTATGTCAACAAAAATGTTATAGACATTTTAGTACTTGGTGCCGCTTCAAGAACTGGCATTGTCAAGAGATTCAAGTCCACAGATATCCCAAGTAGTGTGTCAAAAGGAGCACCAGATTTCTGCACAGTTTACATTATTGGCAGCAAAGGCAAGATTTCTTCAATGCGACAATCCACAGCTCCGGCGCCTGCAAAGCCCACTCCTCCTCCGCGCAGCCAGCCCGCCCCGCCGCGCCCTCAGTTGCTGCATCAGCTCACCAACGCCTCCGAGGTTGCAGCCGAGCAGTCGAACCATTCACGCTCCCAACCGTCTAGATATTTAGAGACTCAAGAAAGCACGTTATCAAATCCACCTCATCGTGCCATTCATGAAGATTTTGAAATCAAGTCGCCATTTCTTAGGCCGGGTTCAAGGGCTTCAATGGGCAAAGGGGTGGAGCCATTCACGCCAGATTCCGACATATCGTTCGTGAGCAGCGGCAGGAGGAGCGTGGACCGAGGGTTCCCGTCAGCGTGGAACTCCGGCGGCGACTCGTATCGCCTTTCCAACGGCTCTGAGTTTGAAAGTTTCAGCCCGGGTCCGGCCTCGCCTTCGCCTATCGTGGGAGTGGGAGTGGGAGGAGGAGGAGGAAGGAAGTCCGTTGATAATCATAATCACAACGCCTCTTCCAATACTTACCCTCAGGAAATGTCCTCTTGCTCTCTAGAAAGCGAGACCTTCTCTTGGGCTTCCTATTCAAATGCCCAGGATGATGTTGAAGCTGAGATGAGAAGGCTGAAATTGGAGCTCAAACAAACCATGGACATGTACAGTACTGCCTGCAAAGAAGCCCTAAACGCCAAGCAAAAGGCGAACGAGCTCCACCGCTGGAAACTGGAAGAAGAACAGAGATTAGAAGAGGCGAGACTGGCGGAGGAAGCAGCATTGGCGATGGCAGAGAAGGAGAAGGTGAAATGCAAAGCGGCGATGGAGGCAGCCGAAGCCGCACAAAAGATCGCAGCACTCGAGGCGAGGAAAAGAGCGACCGCTGAGAAAATGGCGGACATGGAAGCAGAGGAAACCAAAAAAGCACTTGCAGGATTCGGCCATGGAGATATCGGATACAGGAAGTACACAATCGAGGAAATCGAAGCCGCCACGAACGGCTTCTCCGCTACTCAGAAGATCGGCGAAGGCGGTTACGGTCCGGTCTTCCGTGGAGAACTCGACCACACGCCGGTCGCGATCAAGGTCCTCCGGCCGGACGCCGCTCAAGGCCGATCGCAATTTCAGCAAGAGGTTGAGGTTCTAAGCTGTATTCGACATCCAAATATGGTTCTCCTCCTCGGAGCCTGTCCTGAGAACGGCTGTTTAGTTTACGAATTCATGGCGAACGGAAGCTTAGAAGACTGTCTCTTCCGAAAACCCGAGGATCCAGTTCTTCCGTGGCAGTTGCGATTCCGAATCGCGGCGGAGATCGCGACCGGACTTCTCTTCCTGCACCAAACCAGACCAGAGCCGATCGTGCATCGCGATCTGAAACCGGGGAACATTTTGCTAGATCGGAACTACGTGAGCAAAATCAGCGACGTCGGACTGGCAAGGCTGGTGCCTCCATCGGTGGCCAATTCGGTGACTCAGTATCGGATGACGGCGACGGCAGGGACGTTCTTCTACATCGATCCAGAGTATCAGCAAACAGGACTGCTAGGGATTAAATCGGACATTTACTCGCTCGGTGTGATGCTTCTGCAAATAATCACGGCCAGGCCGCCGATCGGACTGGCGCACGCCGTCGGCAGGGCGATTGAGAAGGGGAAATTTGAAGAGATGCTTGATCCGGATGTGAAGGATTGGCCGGTTGAAGAAGCTTTGAAGTTTGCGAAGCTTTCGATTCAGTGTGCGGAGATGAGGAAGAGAGATCGACCGGATCTTGGGAAGGTGGTGCTGCCGGAGCTCAATCGGTTGAGAGCGATCGCGGAAGAGAGTATGGGAATTCGGCCATACAGTAGCAGTGCGTCTTCATCGCCATGTGCAAGCCAAGCTTCTTCTTCTCAGGTAACTTCCCTTCCTTTCTTTCCCGCCATTGATGCTGATTAG 2412 52.65 MARGSGAPKKDESVAVAVDKDKFSLQAVKWTIERLLSKGQVLTLVHVKQKSSNSAMNLGADSDEAALYRQQLENHARDQFFLPFRCMCTRTNVTCNEVILEEAEISKTLINYVNKNVIDILVLGAASRTGIVKRFKSTDIPSSVSKGAPDFCTVYIIGSKGKISSMRQSTAPAPAKPTPPPRSQPAPPRPQLLHQLTNASEVAAEQSNHSRSQPSRYLETQESTLSNPPHRAIHEDFEIKSPFLRPGSRASMGKGVEPFTPDSDISFVSSGRRSVDRGFPSAWNSGGDSYRLSNGSEFESFSPGPASPSPIVGVGVGGGGGRKSVDNHNHNASSNTYPQEMSSCSLESETFSWASYSNAQDDVEAEMRRLKLELKQTMDMYSTACKEALNAKQKANELHRWKLEEEQRLEEARLAEEAALAMAEKEKVKCKAAMEAAEAAQKIAALEARKRATAEKMADMEAEETKKALAGFGHGDIGYRKYTIEEIEAATNGFSATQKIGEGGYGPVFRGELDHTPVAIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPENGCLVYEFMANGSLEDCLFRKPEDPVLPWQLRFRIAAEIATGLLFLHQTRPEPIVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVANSVTQYRMTATAGTFFYIDPEYQQTGLLGIKSDIYSLGVMLLQIITARPPIGLAHAVGRAIEKGKFEEMLDPDVKDWPVEEALKFAKLSIQCAEMRKRDRPDLGKVVLPELNRLRAIAEESMGIRPYSSSASSSPCASQASSSQVTSLPFFPAIDAD 803
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 38373645 38379750 + Lag0006160.1 Lac6g2191 611960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g2191 803 ProSiteProfiles Protein kinase domain profile. 494 757 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac6g2191 803 Coils Coil 406 463 - -
Lac6g2191 803 FunFam Os07g0541700 protein 567 657 - -
Lac6g2191 803 Gene3D Transferase(Phosphotransferase) domain 1 567 771 - -
Lac6g2191 803 Pfam Universal stress protein family 14 133 IPR006016 -
Lac6g2191 803 Pfam Protein tyrosine and serine/threonine kinase 496 752 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac6g2191 803 MobiDBLite consensus disorder prediction 772 791 - -
Lac6g2191 803 MobiDBLite consensus disorder prediction 173 188 - -
Lac6g2191 803 SUPERFAMILY Protein kinase-like (PK-like) 478 753 IPR011009 -
Lac6g2191 803 PANTHER OS02G0152300 PROTEIN 14 776 IPR051348 -
Lac6g2191 803 CDD STK_N 13 161 - -
Lac6g2191 803 SMART serkin_6 494 757 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac6g2191 803 Gene3D Phosphorylase Kinase; domain 1 476 566 - -
Lac6g2191 803 Coils Coil 360 380 - -
Lac6g2191 803 MobiDBLite consensus disorder prediction 166 230 - -
Lac6g2191 803 Gene3D HUPs 12 156 IPR014729 -
Lac6g2191 803 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac6g2191 803 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 469 566 - -
Lac6g2191 803 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 13 135 - -
Lac6g2191 803 MobiDBLite consensus disorder prediction 190 228 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0696 Lac-Chr2:5260915 Lac6g2191 Lac-Chr6:38373645 1.20E-219 dispersed
Lac6g2191 Lac-Chr6:38373645 Lac6g3081 Lac-Chr6:48360680 1.80E-105 dispersed
Lac6g2191 Lac-Chr6:38373645 Lac6g1163 Lac-Chr6:11055113 4.70E-226 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86275 PF07714 PK_Tyr_Ser-Thr 1.80E-37 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g2191 - - - 0.0